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GENE：SUPT4H1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SUPT4H1
FullNmae SPT4 homolog, DSIF elongation factor subunit
LocusType gene with protein product
Status Approved
HGNC_id HGNC:11467
EnsembleID ENSG00000213246
Uniprot P63272

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SUPT4H1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SUPT4H1 GO:0000122,GO:0000993,GO:0005515,GO:0005634,GO:0005654,GO:0005654,GO:0006325,GO:0006355,GO:0006368,GO:0008270,GO:0032044,GO:0032044,GO:0032044,GO:0032785,GO:0032786,GO:0034243,GO:0034243,GO:0034244,GO:0045944,GO:0046982

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
SUPT4H1 hsa:6827 path:hsa03250 Viral life cycle - HIV-1 - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
E2F4 SUPT4H1 17531812 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
ETS1 SUPT4H1 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 SUPT4H1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 SUPT4H1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
YBX1 SUPT4H1 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 SUPT4H1 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 SUPT4H1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SUPT4H1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 SUPT4H1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SUPT4H1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000016FF9C SUPT4H1 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS000000B1C9 SUPT4H1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00002367FA SUPT4H1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000C4DB5 SUPT4H1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00006097A6 SUPT4H1 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
SUPT4H1 CDK7 25361965 interaction type N/A PTMCode2
CDK7 SUPT4H1 25361965 interaction type N/A PTMCode2
SUPT4H1 SSRP1 25361965 interaction type N/A PTMCode2
SSRP1 SUPT4H1 25361965 interaction type N/A PTMCode2
SUPT4H1 POLR2B 25361965 interaction type N/A PTMCode2
POLR2B SUPT4H1 25361965 interaction type N/A PTMCode2
SUPT4H1 CDK9 25361965 interaction type N/A PTMCode2
CDK9 SUPT4H1 25361965 interaction type N/A PTMCode2
SUPT4H1 SUPT5H 25361965 interaction type N/A PTMCode2
SUPT5H SUPT4H1 25361965 interaction type N/A PTMCode2
SUPT4H1 RTF1 25361965 interaction type N/A PTMCode2
RTF1 SUPT4H1 25361965 interaction type N/A PTMCode2
SUPT4H1 POLR2F 25361965 interaction type N/A PTMCode2
POLR2F SUPT4H1 25361965 interaction type N/A PTMCode2
POLR2E SUPT4H1 25361965 interaction type N/A PTMCode2
SUPT4H1 POLR2E 25361965 interaction type N/A PTMCode2
SUPT16H SUPT4H1 25361965 interaction type N/A PTMCode2
SUPT4H1 SUPT16H 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
TMA16 SUPT4H1 25348397 N/A physical interaction ComPPI
EIF3E SUPT4H1 25348397 N/A physical interaction ComPPI
PAK5 SUPT4H1 25348397 N/A physical interaction ComPPI
GTF2F2 SUPT4H1 25348397 N/A physical interaction ComPPI
ZMYND8 SUPT4H1 25348397 N/A physical interaction ComPPI
XRCC5 SUPT4H1 12391174 14525934 25348397 N/A experimental interaction detection,in vitro,in vivo ComPPI,HPRD
CSNK2A1 SUPT4H1 25348397 N/A physical interaction ComPPI
FGF9 SUPT4H1 25348397 N/A physical interaction ComPPI
EWSR1 SUPT4H1 25348397 N/A physical interaction ComPPI
HTATSF1 SUPT4H1 10454543 14525934 25348397 N/A experimental interaction detection,in vivo ComPPI,HPRD
PDLIM1 SUPT4H1 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
POLR2A SUPT4H1 25348397 N/A physical interaction ComPPI
DOK4 SUPT4H1 25348397 N/A physical interaction ComPPI
SUPT5H SUPT4H1 10075709 10454543 12653964 12718890 14525934 17404243 19860741 22939629 24234451 25348397 25416956 26344197 26496610 26789250 27107012 27898060 association,physical association anti tag coimmunoprecipitation,cross-linking study,experimental interaction detection,far western blotting,molecular sieving,pull down,physical interaction,mammalian protein protein interaction trap,in vitro,split luciferase complementation,validated two hybrid,barcode fusion genetics two hybrid ComPPI,HPRD,IntAct,OmniPath
SUPT4H1 ANXA5 14525934 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SUPT4H1 NSG2 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
SUPT4H1 LRIF1 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
SUPT4H1 APP 25348397 N/A physical interaction ComPPI
SUPT4H1 MOV10 25348397 N/A physical interaction ComPPI
SUPT4H1 NXF1 25348397 N/A physical interaction ComPPI
SUPT4H1 EIF3D 25348397 N/A physical interaction ComPPI
SUPT4H1 NAP1L1 25348397 N/A physical interaction ComPPI
SUPT4H1 NCL 25348397 N/A physical interaction ComPPI
SUPT4H1 POLR2F 25348397 N/A physical interaction ComPPI
SUPT4H1 SUPT6H 25348397 N/A physical interaction ComPPI
SUPT4H1 RNGTT 25348397 N/A physical interaction ComPPI
SUPT4H1 LRRK2 24234451 25348397 29513927 N/A protein array ComPPI,IntAct
SUPT4H1 MFHAS1 24234451 25348397 29513927 N/A protein array ComPPI,IntAct
LEO1 SUPT4H1 25348397 N/A physical interaction ComPPI

Visualization










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