Gene Information gene info

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GENE：TAF1B

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol TAF1B
FullNmae TATA-box binding protein associated factor, RNA polymerase I subunit B
LocusType gene with protein product
Status Approved
HGNC_id HGNC:11533
EnsembleID ENSG00000115750
Uniprot Q53T94

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
TAF1B immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
TAF1B GO:0001164,GO:0001164,GO:0001188,GO:0005515,GO:0005634,GO:0005654,GO:0005654,GO:0005668,GO:0005730,GO:0006351,GO:0017025,GO:0042790,GO:0046872,GO:0070860,GO:0070860

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
APP TAF1B 21832049 23180781 physical association protein array InnateDB
SRPK1 TAF1B 23180781 23602568 phosphorylation reaction protein kinase assay InnateDB

Source Target Pmid Interactiontype Methods Database
AR TAF1B 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 TAF1B 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 TAF1B 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 TAF1B 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 TAF1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA TAF1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF TAF1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 TAF1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 TAF1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 TAF1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS TAF1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A TAF1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 TAF1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
UBTF TAF1B 10082553 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00005CCD18 TAF1B 22100165 25416803 mrna cleavage,inhibition clip TarBase
URS000039607D TAF1B 22100165 25416803 mrna cleavage,inhibition clip TarBase
URS000049FAE8 TAF1B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000C5969 TAF1B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000023F8DA TAF1B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000753AD TAF1B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000038446A TAF1B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000008931A TAF1B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000005CE28 TAF1B 23824327 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
TAF1B TP53 25361965 interaction type N/A PTMCode2
TP53 TAF1B 25361965 interaction type N/A PTMCode2
TAF1B UBTF 25361965 interaction type N/A PTMCode2
UBTF TAF1B 25361965 interaction type N/A PTMCode2
TAF1B TAF1D 25361965 interaction type N/A PTMCode2
TAF1D TAF1B 25361965 interaction type N/A PTMCode2
TAF1B TAF1A 25361965 interaction type N/A PTMCode2
TAF1A TAF1B 25361965 interaction type N/A PTMCode2
TAF1B TAF1C 25361965 interaction type N/A PTMCode2
TAF1C TAF1B 25361965 interaction type N/A PTMCode2
THAP7 TAF1B 25361965 interaction type N/A PTMCode2
TAF1B THAP7 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
THAP7 TAF1B 15561719 16195249 25348397 27898060 N/A physical interaction ComPPI,OmniPath
SET TAF1B 17318177 24234451 25348397 physical association anti tag coimmunoprecipitation,pull down ComPPI,IntAct
NIFK TAF1B 25348397 N/A physical interaction ComPPI
H4C1 TAF1B 25348397 N/A physical interaction ComPPI
TBP TAF1B 14525934 17318177 24234451 25348397 26496610 7801123 association,physical association affinity chromatography technology,anti tag coimmunoprecipitation,experimental interaction detection,pull down,physical interaction,in vitro ComPPI,HPRD,IntAct
EP300 TAF1B 25348397 N/A physical interaction ComPPI
KAT2B TAF1B 25348397 N/A physical interaction ComPPI
OAZ1 TAF1B 25348397 N/A physical interaction ComPPI
UBTF TAF1B 25348397 N/A physical interaction ComPPI
TAF1A TAF1B 14525934 17318177 24234451 25348397 7801123 physical association anti tag coimmunoprecipitation,experimental interaction detection,physical interaction,in vitro ComPPI,HPRD,IntAct
CALR TAF1B 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
MYC TAF1B 14525934 15723054 25348397 N/A experimental interaction detection,in vivo ComPPI,HPRD
TRIM24 TAF1B 12393749 14525934 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
H2BC21 TAF1B 25348397 N/A physical interaction ComPPI
NEDD4L TAF1B 25348397 N/A physical interaction ComPPI
SRPK1 TAF1B 23602568 24234451 25348397 phosphorylation reaction physical interaction,protein kinase assay ComPPI,IntAct
H3-4 TAF1B 25348397 N/A physical interaction ComPPI
H3C15 TAF1B 25348397 N/A physical interaction ComPPI
TAF1B TAF1C 17318177 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction,in vitro ComPPI,IntAct
TAF1B RRN3 11250903 14525934 25348397 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
TAF1B TP53 10913176 14525934 25348397 N/A experimental interaction detection,physical interaction ComPPI,HPRD
TAF1B H2AC20 25348397 N/A physical interaction ComPPI
TAF1B ESR1 12511607 25348397 27898060 N/A physical interaction ComPPI,OmniPath
TAF1B RXRA 25348397 N/A physical interaction ComPPI
TAF1B PGR 25348397 N/A physical interaction ComPPI
TAF1B HDAC1 25348397 N/A physical interaction ComPPI
TAF1B NEDD4 25348397 N/A physical interaction ComPPI
TAF1B APP 25348397 N/A physical interaction ComPPI
TAF1B NAPB 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
TAF1B EAF1 25348397 N/A physical interaction ComPPI
TAF1B MPP1 25348397 N/A physical interaction ComPPI
TAF1B FERMT3 25348397 N/A physical interaction ComPPI
TAF1B NAF1 25348397 N/A physical interaction ComPPI
TAF1B BRCA1 25348397 N/A physical interaction ComPPI
TAF1B ZNF2 25348397 N/A physical interaction ComPPI
TAF1B RRP8 25348397 N/A physical interaction ComPPI
TAF1B MECP2 25348397 N/A physical interaction ComPPI
H3C1 TAF1B 25348397 N/A physical interaction ComPPI
POLR1A TAF1B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TAF1D TAF1B 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TRIM44 TAF1B 25348397 N/A physical interaction ComPPI
ARM TAF1B 24234451 25294943 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
TAF1B TAF1B 14525934 7801123 N/A experimental interaction detection HPRD

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