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GENE：CHD6

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol CHD6
FullNmae chromodomain helicase DNA binding protein 6
LocusType gene with protein product
Status Approved
HGNC_id HGNC:19057
EnsembleID ENSG00000124177
Uniprot Q8TD26

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
CHD6 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
CHD6 GO:0000785,GO:0001221,GO:0003677,GO:0003682,GO:0004386,GO:0005524,GO:0005634,GO:0005654,GO:0006338,GO:0008094,GO:0010468,GO:0016887,GO:0042393,GO:0045454,GO:0045944,GO:0140658

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR CHD6 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 CHD6 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 CHD6 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 CHD6 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
HIF1A CHD6 19828020 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
IGF1R CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 CHD6 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000237AF9 CHD6 18185580 25416803 mrna cleavage,inhibition array technology TarBase

Source Target Pmid Interactiontype Methods Database
DYNLL1 CHD6 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
ZFYVE9 CHD6 14525934 15231748 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
H2BC4 CHD6 25348397 N/A physical interaction ComPPI
RACGAP1 CHD6 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
ARAF CHD6 20936779 24234451 25348397 physical association physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach ComPPI,IntAct
CHD6 NFE2L2 14525934 16314513 25348397 27898060 N/A two hybrid,experimental interaction detection,in vivo,two hybrid ComPPI,HPRD,OmniPath
CHD6 AIRE 25348397 N/A physical interaction ComPPI
CHD6 TOLLIP 20936779 24234451 25348397 physical association physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach ComPPI,IntAct
CHD6 CHD3 25348397 N/A physical interaction ComPPI
CHD6 H3-4 25348397 N/A physical interaction ComPPI
CHD6 H2BC11 25348397 N/A physical interaction ComPPI
CHD6 SEC16A 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CHD6 TENT4B 25348397 N/A physical interaction ComPPI
CHD6 CDCA5 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CHD6 ESR1 25348397 N/A physical interaction ComPPI
CHD6 EGFR 25348397 N/A physical interaction ComPPI
CHD6 HNRNPL 25348397 N/A physical interaction ComPPI
SOX2 CHD6 25348397 N/A physical interaction ComPPI
HMGN2 CHD6 24234451 30021884 physical association cross-linking study IntAct

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