Gene Information gene info

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GENE：ECHDC1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol ECHDC1
FullNmae ethylmalonyl-CoA decarboxylase 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:21489
EnsembleID ENSG00000093144
Uniprot Q9NTX5

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
ECHDC1 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
ECHDC1 GO:0004492,GO:0005515,GO:0005829,GO:0005829,GO:0006635,GO:0016831

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
ECHDC1 hsa:55862 path:hsa00640 Propanoate metabolism - Homo sapiens (human)
ECHDC1 hsa:55862 path:hsa01100 Metabolic pathways - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
APP ECHDC1 21832049 23180781 physical association protein array InnateDB

Source Target Pmid Interactiontype Methods Database
ETS1 ECHDC1 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA2 ECHDC1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
YBX1 ECHDC1 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 ECHDC1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA ECHDC1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF ECHDC1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 ECHDC1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 ECHDC1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 ECHDC1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A ECHDC1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF ECHDC1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 ECHDC1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000171CD1 ECHDC1 18362358 rna interference,inhibition array technology miRSponge
URS0000171CD1 ECHDC1 18362358 25416803 mrna cleavage,inhibition array technology TarBase
URS00001CC379 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000079F78 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000001EB3 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00003D8730 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000122ED0 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000032EF64 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000237CBD ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000029979D ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000000B1C9 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00000A07C1 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000031E12 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000324096 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000243FF1 ECHDC1 21572407 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
PAK5 ECHDC1 24234451 25348397 27499296 association anti tag coimmunoprecipitation ComPPI,IntAct
DUSP1 ECHDC1 25348397 N/A physical interaction ComPPI
GORASP2 ECHDC1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
GGA1 ECHDC1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
PNP ECHDC1 25348397 N/A physical interaction ComPPI
WIPI2 ECHDC1 20562859 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
SCLT1 ECHDC1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
IL13RA2 ECHDC1 25348397 N/A physical interaction ComPPI
APP ECHDC1 25348397 N/A physical interaction ComPPI
RMDN1 ECHDC1 25348397 N/A physical interaction ComPPI
DUSP28 ECHDC1 25348397 N/A physical interaction ComPPI
ECHDC1 VKORC1 25348397 N/A physical interaction ComPPI
ECHDC1 SNAP47 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
HSCB ECHDC1 24234451 25348397 28380382 association anti bait coimmunoprecipitation ComPPI,IntAct
OXCT2 ECHDC1 25348397 N/A physical interaction ComPPI
H2BC9 ECHDC1 24234451 30021884 physical association cross-linking study IntAct
MOK ECHDC1 24234451 30021884 physical association cross-linking study IntAct

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