GENE：RCAN3
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | RCAN3 |
| FullNmae | RCAN family member 3 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:3042 |
| EnsembleID | ENSG00000117602 |
| Uniprot | Q9UKA8 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| RCAN3 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
| RCAN3 | autosis | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| RCAN3 | GO:0003723,GO:0005515,GO:0005634,GO:0005737,GO:0005829,GO:0008597,GO:0009653,GO:0019722,GO:0019902,GO:0031013 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| ETS1 | RCAN3 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| GATA1 | RCAN3 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| GATA2 | RCAN3 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| GATA3 | RCAN3 | 21878914 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| FOXA1 | RCAN3 | 18971253 21878914 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| YBX1 | RCAN3 | 19151767 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| TFAP2C | RCAN3 | 20629094 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| FOXP3 | RCAN3 | 20554955 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| SMARCA4 | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CEBPA | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F1 | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXP1 | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| RUNX1 | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TRIM28 | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| ZNF263 | RCAN3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS000042935A | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000AA464 | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000007D64A | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000F0F49 | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000040EE1D | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000041CB9C | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000171CD1 | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000075994C | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000D2680 | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000345DEB | RCAN3 | 20371350 23446348 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000AB32B | RCAN3 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000239117 | RCAN3 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000D0874 | RCAN3 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00003E226A | RCAN3 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000498DAA | RCAN3 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004B4B85 | RCAN3 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000435A77 | RCAN3 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000021D7C8 | RCAN3 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| TNNI3 | RCAN3 | 14525934 16516408 25348397 27898060 | N/A | two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid | ComPPI,HPRD,OmniPath |
| GRB10 | RCAN3 | 24234451 25348397 25814554 | physical association | two hybrid,physical interaction,two hybrid array,luminescence based mammalian interactome mapping,validated two hybrid | ComPPI,IntAct |
| UNC119 | RCAN3 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| EPS8 | RCAN3 | 24234451 25348397 25814554 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| TRIM23 | RCAN3 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| ZDHHC17 | RCAN3 | 24234451 24705354 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| CDK4 | RCAN3 | 25348397 | N/A | physical interaction | ComPPI |
| PPP3R1 | RCAN3 | 25348397 | N/A | physical interaction | ComPPI |
| PPP3CA | RCAN3 | 25348397 | N/A | physical interaction | ComPPI |
| PPP3CB | RCAN3 | 25348397 | N/A | physical interaction | ComPPI |
| PPP3CC | RCAN3 | 25348397 | N/A | physical interaction | ComPPI |
| RCAN3 | OBSL1 | 25348397 | N/A | physical interaction | ComPPI |
| RCAN3 | PLS1 | 25348397 | N/A | physical interaction | ComPPI |