Gene Information gene info

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GENE：USP38

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol USP38
FullNmae ubiquitin specific peptidase 38
LocusType gene with protein product
Status Approved
HGNC_id HGNC:20067
EnsembleID ENSG00000170185
Uniprot Q8NB14

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
USP38 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
USP38 GO:0004843,GO:0004843,GO:0005515,GO:0005634,GO:0005634,GO:0005737,GO:0005829,GO:0006511,GO:0016579,GO:0016579,GO:0032435,GO:0045824,GO:0140311

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
E2F4 USP38 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
ETS1 USP38 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 USP38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA USP38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF USP38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 USP38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 USP38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 USP38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A USP38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF USP38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 USP38 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00003BBF48 USP38 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00002075FA USP38 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000041E11D USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000272039 USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00000D2680 USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000237CBD USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000032EF64 USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000000B1C9 USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000029979D USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000122ED0 USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00000A07C1 USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000031E12 USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000324096 USP38 21572407 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
VAV2 USP38 18654987 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
UBC USP38 25348397 N/A physical interaction ComPPI
GNB5 USP38 25348397 N/A physical interaction ComPPI
HSPB1 USP38 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RPL7 USP38 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
AHSG USP38 25348397 N/A physical interaction ComPPI
LGALS7 USP38 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
ADAR USP38 25348397 N/A physical interaction ComPPI
USP38 RPS12 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
USP38 H1-3 25348397 N/A physical interaction ComPPI

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