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GENE：LCA5

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol LCA5
FullNmae lebercilin LCA5
LocusType gene with protein product
Status Approved
HGNC_id HGNC:31923
EnsembleID ENSG00000135338
Uniprot Q86VQ0

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
LCA5 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
LCA5 GO:0005515,GO:0005929,GO:0005930,GO:0015031,GO:0032391,GO:0036064,GO:0042073,GO:0044877,GO:0045494

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR LCA5 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
GATA1 LCA5 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 LCA5 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 LCA5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA LCA5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF LCA5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 LCA5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 LCA5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS LCA5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A LCA5 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TP53 LCA5 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000237AF9 LCA5 18185580 25416803 mrna cleavage,inhibition array technology TarBase
URS0000521626 LCA5 17612493 25416803 mrna cleavage,inhibition array technology TarBase
URS0000028BB8 LCA5 17612493 25416803 mrna cleavage,inhibition array technology TarBase
URS00003380CC LCA5 17612493 25416803 mrna cleavage,inhibition array technology TarBase
URS000016D2D4 LCA5 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase

Source Target Pmid Interactiontype Methods Database
TXLNA LCA5 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
MAPRE1 LCA5 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
GCC1 LCA5 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
DYNLL1 LCA5 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TCHP LCA5 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
NOC4L LCA5 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 SRPK2 23602568 24234451 25348397 phosphorylation reaction physical interaction,protein kinase assay ComPPI,IntAct
LCA5 RCOR3 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
LCA5 OFD1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 PCM1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 SSX2IP 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 IPO7 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 PYCR1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 TRIM27 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 SUPT5H 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 CELSR2 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 CLUAP1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 IFT20 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 IFT57 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 KPNB1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 TRAF3IP1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 YWHAE 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 YWHAG 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 YWHAH 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 YWHAZ 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 ZNHIT1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 PGK1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 UBA2 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 IPO5 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 NAP1L4 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 PTCD3 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 TRAF7 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 VPS35 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 NUP155 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 RCN1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 COPS3 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 CTPS1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 YWHAB 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 FKBP4 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 SSBP1 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 NSUN2 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 PSME3 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 UBE2O 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 XPO5 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
LCA5 CEP131 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 CAMSAP1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 CKAP2 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 DVL2 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 GTSE1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 HAUS8 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 IPO8 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 CEP170B 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 MAP7 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 MAP9 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 NEDD1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 ENTR1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 TFIP11 24234451 25348397 26638075 association,physical association physical interaction,two hybrid array,two hybrid prey pooling approach,proximity-dependent biotin identification ComPPI,IntAct
LCA5 TRIM26 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 WDR62 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 WDR83 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 ANKRD28 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 CEP44 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 CEP72 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 HAUS6 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 MED4 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 MRTFA 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 MTUS1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 PIBF1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 PLK1 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 WRAP73 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 ZNF622 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
LCA5 TSPYL1 25348397 N/A physical interaction ComPPI
LCA5 SUFU 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
YWHAQ LCA5 24234451 25348397 26638075 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct

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