GENE：TRAPPC3
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | TRAPPC3 |
| FullNmae | trafficking protein particle complex subunit 3 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:19942 |
| EnsembleID | ENSG00000054116 |
| Uniprot | O43617 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| TRAPPC3 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| TRAPPC3 | GO:0000139,GO:0005515,GO:0005737,GO:0005783,GO:0005794,GO:0005829,GO:0005829,GO:0005829,GO:0006888,GO:0006888,GO:0006891,GO:0006901,GO:0030008,GO:0030008,GO:0033106,GO:0048208,GO:0099022,GO:1990071,GO:1990072 |
Protein-Protein Interaction(String):
Gene-Drug Network:
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| AR | TRAPPC3 | 20610535 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ETS1 | TRAPPC3 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| GATA2 | TRAPPC3 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| YBX1 | TRAPPC3 | 19151767 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| PRDM14 | TRAPPC3 | 18971253 20953172 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| SMARCA4 | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F4 | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXP1 | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TAL1 | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| ZNF263 | TRAPPC3 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| LIG4 | TRAPPC3 | 25348397 | N/A | physical interaction | ComPPI |
| CAD | TRAPPC3 | 25348397 | N/A | physical interaction,tandem affinity purification | ComPPI |
| PDLIM7 | TRAPPC3 | 24234451 25348397 | physical association | physical interaction,inference by socio-affinity scoring | ComPPI,IntAct |
| RAB3IP | TRAPPC3 | 21273506 24234451 25348397 27173435 | association,physical association | molecular sieving,physical interaction,tandem affinity purification,inference by socio-affinity scoring | ComPPI,IntAct |
| EGFR | TRAPPC3 | 25348397 | N/A | physical interaction | ComPPI |
| RAB11A | TRAPPC3 | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| VCAM1 | TRAPPC3 | 19738201 24234451 25348397 | association | cross-linking study,physical interaction | ComPPI,IntAct |
| CDC45 | TRAPPC3 | 21988832 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| BCL2L14 | TRAPPC3 | 25348397 | N/A | physical interaction | ComPPI |
| TRIM25 | TRAPPC3 | 25348397 | N/A | physical interaction | ComPPI |
| TGOLN2 | TRAPPC3 | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| FASN | TRAPPC3 | 25348397 | N/A | physical interaction,tandem affinity purification | ComPPI |
| AMOTL2 | TRAPPC3 | 24234451 24255178 25348397 | association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| TRAPPC3 | TRAPPC2L | 14525934 16189514 21453443 21827752 24234451 25348397 25416956 | physical association | anti tag coimmunoprecipitation,two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,validated two hybrid,inference by socio-affinity scoring,two hybrid | ComPPI,HPRD,IntAct |
| TRAPPC3 | APP | 25348397 | N/A | physical interaction | ComPPI |
| TRAPPC3 | CCDC102B | 25348397 | N/A | physical interaction | ComPPI |
| TRAPPC3 | TRAPPC9 | 18930054 24234451 25348397 | physical association | physical interaction,tandem affinity purification,inference by socio-affinity scoring | ComPPI,IntAct |