GENE:C22orf39
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | C22orf39 |
| FullNmae | chromosome 22 open reading frame 39 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:27012 |
| EnsembleID | ENSG00000242259 |
| Uniprot | Q6P5X5 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| C22orf39 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| C22orf39 | GO:0005515 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| AR | C22ORF39 | 20610535 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ETS1 | C22ORF39 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| PRDM14 | C22ORF39 | 18971253 20953172 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| SMARCA4 | C22ORF39 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CEBPA | C22ORF39 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F4 | C22ORF39 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | C22ORF39 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | C22ORF39 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | C22ORF39 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | C22ORF39 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| RUNX1 | C22ORF39 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| ZNF263 | C22ORF39 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS0000486E0B | C22ORF39 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000047A67D | C22ORF39 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00003E226A | C22ORF39 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00005D986D | C22ORF39 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000508C13 | C22ORF39 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000020579D | C22ORF39 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000913AC | C22ORF39 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000021202F | C22ORF39 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001F0C23 | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00000BE495 | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS000000EF0B | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00005F9738 | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS000023F008 | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00000292B1 | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00002F0130 | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS0000585553 | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS0000076E54 | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00002B0B46 | C22ORF39 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| KRTAP9-2 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| RBPMS | C22ORF39 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| FRS3 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| KRTAP10-8 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| TRIB3 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| EXOSC8 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| MDFI | C22ORF39 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| GRN | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| PSMA1 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| PPP2CB | C22ORF39 | 21900206 24234451 25348397 | physical association | two hybrid,physical interaction | ComPPI,IntAct |
| PLSCR3 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| MAPK8IP2 | C22ORF39 | 25348397 | N/A | physical interaction | ComPPI |
| ID3 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| PFDN5 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| DTX2 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| BANP | C22ORF39 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| ID2 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| TRIM25 | C22ORF39 | 25348397 | N/A | physical interaction | ComPPI |
| INCA1 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| MAGEA11 | C22ORF39 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| CEP76 | C22ORF39 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| C22ORF39 | KRTAP10-3 | 25348397 | N/A | physical interaction | ComPPI |
| C22ORF39 | RIMBP3 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
