Gene Information gene info

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GENE：CCDC90B

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol CCDC90B
FullNmae coiled-coil domain containing 90B
LocusType gene with protein product
Status Approved
HGNC_id HGNC:28108
EnsembleID ENSG00000137500
Uniprot Q9GZT6

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
CCDC90B mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
CCDC90B immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
CCDC90B GO:0005515,GO:0005739,GO:0005739,GO:0031966

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 CCDC90B 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 CCDC90B 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
YBX1 CCDC90B 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 CCDC90B 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 CCDC90B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA CCDC90B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF CCDC90B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 CCDC90B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 CCDC90B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 CCDC90B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A CCDC90B 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000070B1D CCDC90B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000486E0B CCDC90B 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS000047A67D CCDC90B 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00000F4AC3 CCDC90B 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS000020579D CCDC90B 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00000913AC CCDC90B 23313552 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
PIN1 CCDC90B 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
SAT1 CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
CDKN2C CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
TK1 CCDC90B 14525934 16169070 21900206 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SMN1 CCDC90B 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
PSMD11 CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
GORASP2 CCDC90B 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RGL2 CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
CDKN2B CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
EIF2S2 CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
KDM1A CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
PAFAH1B3 CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SERPINB9 CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
BTBD2 CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SDHAF2 CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RNF10 CCDC90B 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
CCDC90B PRDX5 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
CCDC90B TAC3 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach ComPPI,IntAct
CCDC90B NACA 25348397 N/A physical interaction ComPPI
CCDC90B DNM2 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
CCDC90B ANXA7 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
NIPSNAP3A CCDC90B 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct

Source Target Pmid Interactiontype Methods Database
URS00009C13B6 CCDC90B 27087310 direct interaction,inhibition N/A NPInter

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