Gene Information gene info

  1. Home

GENE：DDX55

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol DDX55
FullNmae DEAD-box helicase 55
LocusType gene with protein product
Status Approved
HGNC_id HGNC:20085
EnsembleID ENSG00000111364
Uniprot Q8NHQ9

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
DDX55 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
DDX55 GO:0003723,GO:0003724,GO:0005515,GO:0005524,GO:0005654,GO:0005730,GO:0005730,GO:0005829,GO:0016020,GO:0016887

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
APP DDX55 21832049 23180781 physical association protein array InnateDB

Source Target Pmid Interactiontype Methods Database
E2F4 DDX55 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
ETS1 DDX55 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 DDX55 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF DDX55 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A DDX55 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF DDX55 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000AD002 DDX55 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00003D5391 DDX55 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000427B68 DDX55 20371350 21572407 23313552 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000077AED DDX55 20371350 21572407 23313552 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004719AB DDX55 20371350 21572407 23313552 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001EFEC1 DDX55 20371350 21572407 23313552 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000285DCB DDX55 20371350 21572407 23313552 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000330617 DDX55 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002233F4 DDX55 20371350 21572407 23313552 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002A71AD DDX55 20371350 21572407 23313552 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000272039 DDX55 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000009262D DDX55 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00003FA24D DDX55 20371350 21572407 23313552 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000042619A DDX55 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000025EABA DDX55 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002B0B46 DDX55 23446348 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
KRTAP10-8 DDX55 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
NOL12 DDX55 25348397 N/A physical interaction ComPPI
H2BC4 DDX55 25348397 N/A physical interaction ComPPI
PICK1 DDX55 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RPL10 DDX55 25348397 N/A physical interaction ComPPI
NTRK1 DDX55 25348397 N/A physical interaction ComPPI
AGTRAP DDX55 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RPS6 DDX55 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
H1-4 DDX55 25348397 N/A physical interaction ComPPI
CAND1 DDX55 25348397 N/A physical interaction ComPPI
FOXA1 DDX55 25348397 N/A physical interaction ComPPI
NOP56 DDX55 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RPL23 DDX55 25348397 N/A physical interaction ComPPI
MARCO DDX55 25348397 N/A physical interaction ComPPI
DIMT1 DDX55 25348397 N/A physical interaction ComPPI
DDX56 DDX55 25348397 N/A physical interaction ComPPI
MRPS34 DDX55 25348397 N/A physical interaction ComPPI
DRG2 DDX55 25348397 N/A physical interaction ComPPI
DDX24 DDX55 25348397 N/A physical interaction ComPPI
FGF8 DDX55 25348397 N/A physical interaction ComPPI
GTPBP4 DDX55 25348397 N/A physical interaction ComPPI
DDX18 DDX55 25348397 N/A physical interaction ComPPI
H2BC11 DDX55 25348397 N/A physical interaction ComPPI
APP DDX55 25348397 N/A physical interaction ComPPI
MRPS11 DDX55 25348397 N/A physical interaction ComPPI
DDX55 SETD4 25348397 N/A physical interaction ComPPI

Visualization










  Return