GENE：HERPUD2
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | HERPUD2 |
| FullNmae | HERPUD family member 2 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:21915 |
| EnsembleID | ENSG00000122557 |
| Uniprot | Q9BSE4 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| HERPUD2 | mitotic_cd | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
| HERPUD2 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| HERPUD2 | GO:0005515,GO:0007283,GO:0016020,GO:0030968 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| AR | HERPUD2 | 20610535 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ETS1 | HERPUD2 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| GATA1 | HERPUD2 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| GATA2 | HERPUD2 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| GATA3 | HERPUD2 | 21878914 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| FOXP3 | HERPUD2 | 20554955 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| SMARCA4 | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CEBPA | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F1 | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F4 | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXP1 | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HIF1A | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TRIM28 | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TP53 | HERPUD2 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS000009262D | HERPUD2 | 18591254 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS000075D814 | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000075CC78 | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001C0099 | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000209F04 | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001012BC | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00003AD2AA | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000021202F | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004719AB | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00003A5E54 | HERPUD2 | 21572407 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000171FEC | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000038718E | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000012930C | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000AD02D | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000007FBA | HERPUD2 | 23313552 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000202460 | HERPUD2 | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000427B68 | HERPUD2 | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| SMN1 | HERPUD2 | 25348397 | N/A | two hybrid | ComPPI |
| SLC7A1 | HERPUD2 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| EFNA5 | HERPUD2 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| AICDA | HERPUD2 | 25348397 | N/A | physical interaction | ComPPI |
| TMBIM6 | HERPUD2 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| ELAVL1 | HERPUD2 | 25348397 | N/A | physical interaction | ComPPI |
| ALG10 | HERPUD2 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| NEDD1 | HERPUD2 | 24234451 25348397 26496610 | association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| NAF1 | HERPUD2 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| HERPUD2 | RNASEH2B | 24234451 25348397 26496610 | association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |