Gene Information gene info

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GENE：NCLN

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol NCLN
FullNmae nicalin
LocusType gene with protein product
Status Approved
HGNC_id HGNC:26923
EnsembleID ENSG00000125912
Uniprot Q969V3

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
NCLN immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
NCLN GO:0005515,GO:0005789,GO:0005789,GO:0009966,GO:0016020,GO:0032991,GO:0043022,GO:0043254,GO:0050821,GO:0061635,GO:0160063,GO:0160064

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 NCLN 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 NCLN 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 NCLN 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
YBX1 NCLN 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 NCLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF NCLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 NCLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 NCLN 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00004E008F NCLN 23622248 25416803 27292025 mrna cleavage,inhibition clip,clash TarBase
URS00003D5391 NCLN 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001597DC NCLN 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000000B1C9 NCLN 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000060AABB NCLN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002F74F1 NCLN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000000C73C NCLN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000C4DB5 NCLN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075D1FC NCLN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075A281 NCLN 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS000047A67D NCLN 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS0000381CEC NCLN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000B0E50 NCLN 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS000075BDA4 NCLN 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000006F90B NCLN 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000078918 NCLN 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000021D08 NCLN 25416803 27292025 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
SAP18 NCLN 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
KRTAP5-9 NCLN 25348397 N/A physical interaction ComPPI
MCM2 NCLN 25348397 N/A physical interaction ComPPI
NTRK1 NCLN 25348397 N/A physical interaction ComPPI
CANX NCLN 25348397 N/A physical interaction ComPPI
TNF NCLN 25348397 N/A physical interaction ComPPI
EPRS1 NCLN 25348397 N/A physical interaction ComPPI
HUWE1 NCLN 25348397 N/A physical interaction ComPPI
ARF6 NCLN 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
EGFR NCLN 25348397 N/A physical interaction ComPPI
SSR4 NCLN 25348397 N/A physical interaction ComPPI
TNFRSF14 NCLN 17353931 24234451 25348397 physical association anti bait coimmunoprecipitation ComPPI,IntAct
XRCC3 NCLN 25348397 N/A physical interaction ComPPI
NCLN FBXO6 25348397 N/A physical interaction ComPPI
NCLN ILF3 25348397 N/A physical interaction ComPPI
NCLN DLK1 25348397 N/A physical interaction ComPPI
NCLN RPN2 25348397 N/A physical interaction ComPPI
NCLN FPR2 25348397 N/A physical interaction ComPPI
NCLN AGPAT3 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
NCLN LRRK2 24234451 24725412 25348397 association tandem affinity purification ComPPI,IntAct

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