GENE：NIP7
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | NIP7 |
| FullNmae | nucleolar pre-rRNA processing protein NIP7 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:24328 |
| EnsembleID | ENSG00000132603 |
| Uniprot | Q9Y221 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| NIP7 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| NIP7 | GO:0003723,GO:0005515,GO:0005654,GO:0005730,GO:0005730,GO:0005829,GO:0030687,GO:0042255,GO:0042273 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| ETS1 | NIP7 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| CTCF | NIP7 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXP1 | NIP7 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | NIP7 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F1 | NIP7 | N/A | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F2 | NIP7 | N/A | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS0000065D58 | NIP7 | 18668040 25416803 | mrna cleavage,inhibition | experimental interaction detection | TarBase |
| URS000003ABC4 | NIP7 | 20371350 25416803 26701625 | mrna cleavage,inhibition | nucleotide sequence identification,clip | TarBase |
| URS00003D5391 | NIP7 | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
| URS00001A405B | NIP7 | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
| URS000047A67D | NIP7 | 23313552 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS000039E1E1 | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000221168 | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00003380CC | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00005CC20C | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000045147B | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000345DEB | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000031602A | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000251D0B | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001C11BC | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002C0FCB | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000315338 | NIP7 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000486E0B | NIP7 | 23313552 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS00003E226A | NIP7 | 23313552 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS00005D986D | NIP7 | 23313552 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS0000508C13 | NIP7 | 23313552 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS0000383DF4 | NIP7 | 23313552 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS000014F13C | NIP7 | 23313552 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS00004AF715 | NIP7 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS00003AD231 | NIP7 | 25416803 26701625 | mrna cleavage,inhibition | clip | TarBase |
| URS000075C1E1 | NIP7 | 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| THAP7 | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| NECAB2 | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| CRX | NIP7 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| LZTS2 | NIP7 | 24234451 25348397 25416956 | physical association | physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid | ComPPI,IntAct |
| NPM1 | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| RPL37A | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| EIF3E | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| RPL10 | NIP7 | 24234451 25348397 26496610 | association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| HNRNPU | NIP7 | 24234451 25348397 26496610 | association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| RPS6 | NIP7 | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| RPL4 | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| SOX2 | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| RAB11A | NIP7 | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| CEBPZ | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| GABARAP | NIP7 | 20562859 24234451 25348397 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| H3C1 | NIP7 | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| FOXA1 | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| ELAVL1 | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| NOP56 | NIP7 | 24234451 25348397 26496610 | association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| ILF2 | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| AURKAIP1 | NIP7 | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| BET1 | NIP7 | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| PES1 | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| RRP1B | NIP7 | 20926688 24234451 25348397 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| NIP7 | ZC3H3 | 25348397 | N/A | physical interaction | ComPPI |
| NIP7 | DDX24 | 25348397 | N/A | physical interaction | ComPPI |
| NIP7 | NOP53 | 25348397 | N/A | physical interaction | ComPPI |
| NIP7 | DDX18 | 25348397 | N/A | physical interaction | ComPPI |
| NIP7 | NOP2 | 24234451 25348397 30021884 | physical association | cross-linking study,physical interaction | ComPPI,IntAct |
| NIP7 | RBM28 | 25348397 | N/A | physical interaction | ComPPI |
| NIP7 | PHF8 | 24234451 25348397 26496610 | association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| NIP7 | RPL30 | 25348397 | N/A | physical interaction | ComPPI |
| NIP7 | CNBP | 25348397 | N/A | physical interaction | ComPPI |
| NIP7 | ZC3HAV1 | 25348397 | N/A | physical interaction | ComPPI |
| NIP7 | FBL | 24234451 25348397 29568061 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| RBM4B | NIP7 | 25348397 | N/A | physical interaction | ComPPI |
| NIP7 | PTPN4 | 24234451 30021884 | physical association | cross-linking study | IntAct |
| EXOSC8 | NIP7 | 20528918 27898060 9891085 | N/A | N/A | OmniPath |