GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
RFLNB |
FullNmae |
refilin B |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:28705 |
EnsembleID |
ENSG00000183688 |
Uniprot |
Q8N5W9 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
RFLNB |
immunogenic |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
RFLNB |
GO:0001837,GO:0005737,GO:0031005,GO:0031005,GO:0032432,GO:0048705,GO:0061182,GO:0061572,GO:1900158 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
ETS1 |
RFLNB |
20019798
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
FOXA1 |
RFLNB |
21878914
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
YBX1 |
RFLNB |
19151767
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
CEBPA |
RFLNB |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS00000AA464 |
RFLNB |
20304954
25416803
|
mrna cleavage,inhibition |
array technology |
TarBase |
URS00000B59A2 |
RFLNB |
19074876
25416803
|
mrna cleavage,inhibition |
array technology |
TarBase |
URS00000D5FFC |
RFLNB |
19536157
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001067D1 |
RFLNB |
19536157
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000043C1C3 |
RFLNB |
25416803
27292025
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00003ACE11 |
RFLNB |
25416803
27292025
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00003FBC84 |
RFLNB |
25416803
27292025
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001C0099 |
RFLNB |
25416803
27292025
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000006372A |
RFLNB |
25416803
27292025
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000355E82 |
RFLNB |
25416803
27292025
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000045147B |
RFLNB |
25416803
27292025
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000041FA2C |
RFLNB |
25416803
27292025
|
mrna cleavage,inhibition |
clip |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
PPP1R16A |
RFLNB |
14525934
16169070
24234451
25348397
|
physical association |
two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid |
ComPPI,HPRD,IntAct |
ZBTB16 |
RFLNB |
14525934
16169070
24234451
25348397
|
physical association |
two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid |
ComPPI,HPRD,IntAct |
TNFRSF10C |
RFLNB |
14525934
16169070
24234451
25348397
|
physical association |
two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid |
ComPPI,HPRD,IntAct |
EZR |
RFLNB |
24234451
25348397
29568061
|
association |
proximity-dependent biotin identification |
ComPPI,IntAct |
MED4 |
RFLNB |
25348397
|
N/A |
physical interaction |
ComPPI |
KAT5 |
RFLNB |
14525934
16169070
24234451
25348397
|
physical association |
two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid |
ComPPI,HPRD,IntAct |
Visualization