GENE:RNF165
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | RNF165 |
| FullNmae | arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:31696 |
| EnsembleID | ENSG00000141622 |
| Uniprot | Q6ZSG1 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| RNF165 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Protein-Protein Interaction(String):
Gene-Drug Network:
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| ETS1 | RNF165 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| YBX1 | RNF165 | 19151767 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| TFAP2C | RNF165 | 20629094 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| FOXP3 | RNF165 | 20554955 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| SMARCA4 | RNF165 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | RNF165 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | RNF165 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | RNF165 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | RNF165 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| RUNX1 | RNF165 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| ZNF263 | RNF165 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS000075A9CF | RNF165 | 22100165 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000040FA88 | RNF165 | 22100165 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000553F51 | RNF165 | 22100165 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000019D79B | RNF165 | 22100165 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000364FEF | RNF165 | 22100165 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001799A3 | RNF165 | 22100165 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000010BD8D | RNF165 | 22291592 23708386 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000237AF9 | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000568FF8 | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000EEE35 | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000039A052 | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000065FDF | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000585553 | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000BE495 | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000016FD1A | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000021D7C8 | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004CCA62 | RNF165 | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001F8FF2 | RNF165 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000482389 | RNF165 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000015CE89 | RNF165 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000026A1D | RNF165 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00005D35D9 | RNF165 | 19536157 25416803 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| SKIL | RNF165 | 23610558 24234451 25348397 | physical association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| UBE2D1 | RNF165 | 19690564 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| UBE2E3 | RNF165 | 19690564 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| UBE2D4 | RNF165 | 19690564 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| SMAD7 | RNF165 | 23610558 24234451 25348397 | physical association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| UBE2D2 | RNF165 | 19690564 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| UBC | RNF165 | 25348397 | N/A | physical interaction | ComPPI |
| UBE2N | RNF165 | 19690564 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| HNRNPL | RNF165 | 25348397 | N/A | physical interaction | ComPPI |
| UBE2D3 | RNF165 | 19690564 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| UBE2E1 | RNF165 | 19690564 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
| SMAD6 | RNF165 | 23610558 24234451 25348397 | physical association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| SKI | RNF165 | 23610558 24234451 25348397 | association,physical association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| UBE2W | RNF165 | 19690564 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array | ComPPI,IntAct |
