Gene Information gene info

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GENE：RPTN

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RPTN
FullNmae repetin
LocusType gene with protein product
Status Approved
HGNC_id HGNC:26809
EnsembleID ENSG00000215853
Uniprot Q6XPR3

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RPTN immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
RPTN GO:0001533,GO:0001533,GO:0005509,GO:0005576,GO:0005829,GO:0046914

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR RPTN 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 RPTN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF RPTN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 RPTN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A RPTN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 RPTN 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TP53 RPTN 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00003E5ECC RPTN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000008B558 RPTN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00006DE17B RPTN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000024A59E RPTN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000048D44E RPTN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000007A060 RPTN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00000A939F RPTN 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00004B4B85 RPTN 19536157 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
GABARAPL2 RPTN 20562859 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
MAP1LC3B RPTN 20562859 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
GABARAPL1 RPTN 20562859 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
OTUD4 RPTN 25348397 N/A physical interaction ComPPI

Visualization










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