GeneInfo:
| GeneAttribute |
GeneDescription |
| GeneSymbol |
SDR39U1 |
| FullNmae |
short chain dehydrogenase/reductase family 39U member 1 |
| LocusType |
gene with protein product |
| Status |
Approved |
| HGNC_id |
HGNC:20275 |
| EnsembleID |
ENSG00000100445 |
| Uniprot |
Q9NRG7 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
| SDR39U1 |
immunogenic |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
| GeneSymbol |
Go id |
| SDR39U1 |
GO:0005634,GO:0016491 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| ETS1 |
SDR39U1 |
18971253
20019798
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
| HIF1A |
SDR39U1 |
19828020
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
| YBX1 |
SDR39U1 |
19151767
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
| CEBPA |
SDR39U1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| CTCF |
SDR39U1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| FOXA1 |
SDR39U1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| FOXP1 |
SDR39U1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| HNF4A |
SDR39U1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| MITF |
SDR39U1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| URS00003AFAD1 |
SDR39U1 |
22100165
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS0000475586 |
SDR39U1 |
22100165
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| URS0000243FF1 |
SDR39U1 |
22100165
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
| Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
| PPP1CC |
SDR39U1 |
25348397
|
N/A |
two hybrid,physical interaction |
ComPPI |
| HSPD1 |
SDR39U1 |
25348397
|
N/A |
physical interaction |
ComPPI |
| SLC25A10 |
SDR39U1 |
25348397
|
N/A |
physical interaction |
ComPPI |
| MRPL12 |
SDR39U1 |
25348397
|
N/A |
physical interaction |
ComPPI |
| COX6B1 |
SDR39U1 |
24234451
25348397
27499296
|
association |
anti tag coimmunoprecipitation |
ComPPI,IntAct |
Visualization
