Gene Information gene info

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GENE：SGCD

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SGCD
FullNmae sarcoglycan delta
LocusType gene with protein product
Status Approved
HGNC_id HGNC:10807
EnsembleID ENSG00000170624
Uniprot Q92629

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SGCD mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SGCD immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SGCD GO:0005856,GO:0005886,GO:0007517,GO:0016010,GO:0016012,GO:0016529,GO:0019722,GO:0031503,GO:0042383,GO:0048738,GO:0055013,GO:0055074,GO:0060047,GO:0060977,GO:0086003

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
SGCD hsa:6444 path:hsa05410 Hypertrophic cardiomyopathy - Homo sapiens (human)
SGCD hsa:6444 path:hsa05412 Arrhythmogenic right ventricular cardiomyopathy - Homo sapiens (human)
SGCD hsa:6444 path:hsa05414 Dilated cardiomyopathy - Homo sapiens (human)
SGCD hsa:6444 path:hsa05416 Viral myocarditis - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
EGR1 SGCD 19032775 23180781 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
AR SGCD 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
CEBPA SGCD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SGCD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SGCD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SGCD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SGCD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SGCD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 SGCD 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000237AF9 SGCD 18185580 23824327 25416803 27418678 mrna cleavage,inhibition array technology,clip TarBase
URS00001C85C7 SGCD 22100165 25416803 mrna cleavage,inhibition clip TarBase
URS000039D790 SGCD 22100165 25416803 mrna cleavage,inhibition clip TarBase
URS00004AC389 SGCD 22100165 25416803 mrna cleavage,inhibition clip TarBase
URS000040EC3B SGCD 22012620 23824327 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS000028DE3F SGCD 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000040FA88 SGCD 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00002F3336 SGCD 23824327 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00003E2232 SGCD 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000031B6ED SGCD 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000298BA3 SGCD 23824327 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS000075A611 SGCD 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000CBE63 SGCD 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS0000081E1F SGCD 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00003B6B84 SGCD 19536157 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
SGCD SGCB 25361965 interaction type N/A PTMCode2
SGCB SGCD 25361965 interaction type N/A PTMCode2
DAG1 SGCD 25361965 interaction type N/A PTMCode2
SGCD DAG1 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
SERPINA3 SGCD 23414517 24234451 25348397 physical association two hybrid fragment pooling approach ComPPI,IntAct
FLNC SGCD 10629222 14506720 14525934 24234451 25348397 physical association two hybrid,coimmunoprecipitation,experimental interaction detection,pull down,physical interaction,in vitro,in vivo,two hybrid ComPPI,HPRD,IntAct
SGCD SGCB 14525934 25348397 9864373 N/A experimental interaction detection,physical interaction,in vivo ComPPI,HPRD
SGCD SGCA 14525934 25348397 9864373 N/A experimental interaction detection,in vivo ComPPI,HPRD
SGCD SGCG 14525934 25348397 9864373 N/A experimental interaction detection,in vivo ComPPI,HPRD
SGCD ADA 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
SGCD FAM241A 25348397 N/A physical interaction ComPPI
SGCD DNAJB9 25348397 N/A physical interaction ComPPI
SGCD FAM241B 25348397 N/A physical interaction ComPPI
SGCD ACP2 25348397 N/A physical interaction ComPPI
DAG1 SGCD 24234451 association cross-linking study IntAct

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