Gene Information gene info

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GENE：SGF29

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SGF29
FullNmae SAGA complex associated factor 29
LocusType gene with protein product
Status Approved
HGNC_id HGNC:25156
EnsembleID ENSG00000176476
Uniprot Q96ES7

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SGF29 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SGF29 ferroptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SGF29 cuproptosis 36010978 Derived from the genome-wide CRISPR-Cas9 loss-of-function test reported in previous literature, 347 potential cuproptosis-related genes (FDR < 0.05) were identified, and for a detailed list of genes, see聽Supplementary Table S1. Cuproptosis-related genes

Go Annotation:

GeneSymbol Go id
SGF29 GO:0000122,GO:0000124,GO:0000124,GO:0005515,GO:0005654,GO:0006282,GO:0006355,GO:0006355,GO:0006357,GO:0006357,GO:0035064,GO:0035064,GO:0043484,GO:0043966,GO:0045815,GO:0045893,GO:0045995,GO:0045995,GO:0051302,GO:0051302,GO:0051726,GO:0051726,GO:0070461,GO:0071169,GO:0072686,GO:0090043,GO:0090043,GO:0140672,GO:0140672

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 SGF29 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 SGF29 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SGF29 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SGF29 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 SGF29 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SGF29 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 SGF29 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SGF29 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 SGF29 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
KRT19 SGF29 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TFPT SGF29 25348397 N/A physical interaction ComPPI
NDC80 SGF29 24234451 25348397 25416956 physical association two hybrid,physical interaction,mammalian protein protein interaction trap,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SGF29 KRT15 14525934 16189514 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,validated two hybrid,two hybrid ComPPI,HPRD,IntAct
SGF29 TADA3 14525934 16189514 24234451 25348397 25416956 26496610 association,physical association anti tag coimmunoprecipitation,two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,validated two hybrid,two hybrid ComPPI,HPRD,IntAct
SGF29 USP22 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 ATXN7 25348397 N/A physical interaction ComPPI
SGF29 TRRAP 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 KAT2A 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 DR1 25348397 N/A physical interaction ComPPI
SGF29 MBIP 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 WDR5 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
SGF29 MAP3K7 25348397 N/A physical interaction ComPPI
SGF29 KRT13 25348397 N/A physical interaction ComPPI
SGF29 TCF4 24234451 25348397 25416956 25609649 association,physical association physical interaction,two hybrid array,tandem affinity purification,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SGF29 MED4 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SGF29 CCDC102B 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SGF29 LNX1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SGF29 H3-4 25348397 N/A physical interaction ComPPI
SGF29 TAF5L 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 TAF10 25348397 N/A physical interaction ComPPI
SGF29 SF3B3 25348397 N/A physical interaction ComPPI
SGF29 ENY2 25348397 N/A physical interaction ComPPI
SGF29 ATXN7L3 25348397 N/A physical interaction ComPPI
SGF29 KAT2B 25348397 N/A physical interaction ComPPI
SGF29 TAF12 25348397 N/A physical interaction ComPPI
SGF29 SF3B5 25348397 N/A physical interaction ComPPI
SGF29 TADA2B 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 ACTG1 25348397 N/A physical interaction ComPPI
SGF29 SNAP29 25348397 N/A physical interaction ComPPI
SGF29 TP53BP2 25348397 N/A physical interaction ComPPI
SGF29 DTNA 25348397 N/A physical interaction ComPPI
SGF29 DTNB 25348397 N/A physical interaction ComPPI
SGF29 EDC4 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 CEP250 25348397 N/A physical interaction ComPPI
SGF29 TAF9B 25348397 N/A physical interaction ComPPI
SGF29 KIF2C 25348397 N/A physical interaction ComPPI
SGF29 SH3GL1 25348397 N/A physical interaction ComPPI
SGF29 FAAP100 25348397 N/A physical interaction ComPPI
SGF29 KIF5B 25348397 N/A physical interaction ComPPI
SGF29 REPS1 25348397 N/A physical interaction ComPPI
SGF29 BANP 25348397 N/A physical interaction ComPPI
SGF29 RAB11FIP5 25348397 N/A physical interaction ComPPI
SGF29 FYCO1 25348397 N/A physical interaction ComPPI
SGF29 BUD31 25348397 N/A physical interaction ComPPI
SGF29 H2BC11 25348397 N/A physical interaction ComPPI
SGF29 H2BC4 25348397 N/A physical interaction ComPPI
SGF29 TAF6L 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 CCDC82 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 ZBTB33 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 BOD1L1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SGF29 BCOR 25348397 N/A physical interaction ComPPI
SGF29 CARD8 25348397 N/A physical interaction ComPPI
SGF29 TPM3 25348397 N/A physical interaction ComPPI
SGF29 IFT57 25348397 N/A physical interaction ComPPI
SGF29 SFN 15778465 24234451 25348397 physical association tandem affinity purification ComPPI,IntAct
SGF29 H3C1 21685874 24234451 25348397 27898060 N/A fluorescence polarization spectroscopy,isothermal titration calorimetry,x-ray crystallography ComPPI,IntAct,OmniPath
SGF29 TFIP11 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SGF29 KRT33B 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SGF29 SYNPO 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SGF29 BECN1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SGF29 KRT16 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SGF29 MYF5 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SGF29 PLEKHA7 24234451 25348397 28877994 association anti bait coimmunoprecipitation ComPPI,IntAct
SGF29 TP53BP1 24234451 25348397 29656893 association proximity-dependent biotin identification ComPPI,IntAct
H2BC21 SGF29 24234451 30021884 physical association cross-linking study IntAct

Visualization










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