Gene Information gene info

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GENE：SMG9

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SMG9
FullNmae SMG9 nonsense mediated mRNA decay factor
LocusType gene with protein product
Status Approved
HGNC_id HGNC:25763
EnsembleID ENSG00000105771
Uniprot Q9H0W8

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SMG9 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SMG9 ferroptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SMG9 GO:0000184,GO:0000184,GO:0001654,GO:0001701,GO:0005515,GO:0005829,GO:0007420,GO:0007507,GO:0042802,GO:0043066

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
IQGAP1 SMG9 21640080 23180781 physical association anti tag coimmunoprecipitation InnateDB
SMG1 SMG9 19417104 23180781 physical association anti tag coimmunoprecipitation InnateDB
TRIM23 SMG9 23180781 25416956 physical association two hybrid InnateDB

Source Target Pmid Interactiontype Methods Database
AR SMG9 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 SMG9 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 SMG9 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
TFAP2C SMG9 20629094 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 SMG9 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SMG9 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 SMG9 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SMG9 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 SMG9 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HIF1A SMG9 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SMG9 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
GOLGA2 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
KRTAP10-8 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
KRT31 SMG9 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RBM8A SMG9 19417104 24234451 25348397 association anti bait coimmunoprecipitation,physical interaction ComPPI,IntAct
RUVBL1 SMG9 25348397 N/A physical interaction ComPPI
TRIP6 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PRKAR1B SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
EPHA1 SMG9 25348397 N/A physical interaction ComPPI
TRAF2 SMG9 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SMG1 SMG9 19417104 20371770 20817927 24234451 25348397 26496610 association anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,molecular sieving,pull down,physical interaction ComPPI,IntAct
TRIM23 SMG9 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SYP SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PFDN5 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
UPF1 SMG9 25348397 N/A anti tag coimmunoprecipitation,physical interaction ComPPI
TTC19 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PRPSAP1 SMG9 25348397 N/A physical interaction ComPPI
ARFIP2 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TRIM27 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
INCA1 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
CNTROB SMG9 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
CTAG1A SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
STIL SMG9 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
CEP76 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
ZNF655 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
DDX11 SMG9 25348397 N/A physical interaction ComPPI
PHF1 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PLEKHG4 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SLC50A1 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
FNTB SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
DCAF1 SMG9 25348397 N/A physical interaction ComPPI
HSF2BP SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
KRT34 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
DDX12P SMG9 25348397 N/A physical interaction ComPPI
PNMA3 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PPP2R3C SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SMG8 SMG9 19417104 20817927 24234451 25348397 26496610 27898060 association,physical association anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,molecular sieving,pull down,physical interaction ComPPI,IntAct,OmniPath
SMG9 AK8 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SMG9 NFKBID 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SMG9 ZMYND12 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SMG9 DGAT2L6 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SMG9 RASSF10 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SMG9 SLC17A9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SMG9 SMG9 20817927 24234451 association,physical association anti tag coimmunoprecipitation,molecular sieving,pull down IntAct
IQGAP1 SMG9 21640080 27898060 N/A N/A OmniPath

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