GENE：SNAPC1
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | SNAPC1 |
| FullNmae | small nuclear RNA activating complex polypeptide 1 |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:11134 |
| EnsembleID | ENSG00000023608 |
| Uniprot | Q16533 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| SNAPC1 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| SNAPC1 | GO:0000995,GO:0005515,GO:0005654,GO:0005654,GO:0005730,GO:0016251,GO:0019185,GO:0042795,GO:0042796,GO:0043565 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| AR | SNAPC1 | 20610535 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ETS1 | SNAPC1 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| GATA3 | SNAPC1 | 19559773 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| YBX1 | SNAPC1 | 19151767 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| FOXP3 | SNAPC1 | 20554955 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| SMARCA4 | SNAPC1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CEBPA | SNAPC1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | SNAPC1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | SNAPC1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HIF1A | SNAPC1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TRIM28 | SNAPC1 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| POU2F1 | SNAPC1 | 9644240 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| SP1 | SNAPC1 | 9644240 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| DAND5 | SNAPC1 | 9644240 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MYC | SNAPC1 | N/A | trascriptional regulation,stimulation | inferred by curator | TFlink |
| NFIC | SNAPC1 | N/A | trascriptional regulation,stimulation | inferred by curator | TFlink |
| USF1 | SNAPC1 | N/A | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS00000ED600 | SNAPC1 | 20215506 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS00003E5E03 | SNAPC1 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS00004977C5 | SNAPC1 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS00000C48FA | SNAPC1 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS000003BF62 | SNAPC1 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
| URS00001D6605 | SNAPC1 | 25416803 27292025 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| RHOXF2 | SNAPC1 | 25348397 | N/A | physical interaction | ComPPI |
| TP53BP1 | SNAPC1 | 24234451 25348397 29656893 | association | proximity-dependent biotin identification | ComPPI,IntAct |
| EXOC8 | SNAPC1 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| TBP | SNAPC1 | 14525934 25348397 8524284 | N/A | biophysical,experimental interaction detection,physical interaction,in vitro | ComPPI,HPRD |
| RB1 | SNAPC1 | 11094070 14525934 25348397 | N/A | experimental interaction detection,physical interaction,in vitro,in vivo | ComPPI,HPRD |
| TRIM29 | SNAPC1 | 25348397 | N/A | physical interaction | ComPPI |
| NR2E3 | SNAPC1 | 25348397 | N/A | physical interaction | ComPPI |
| SNAPC4 | SNAPC1 | 11056176 14525934 25348397 | N/A | experimental interaction detection,physical interaction,in vitro,in vivo | ComPPI,HPRD |
| PSME3 | SNAPC1 | 25348397 | N/A | physical interaction | ComPPI |
| SNAPC1 | HOXA10 | 25348397 | N/A | physical interaction | ComPPI |