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GENE：SNRPD2

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SNRPD2
FullNmae small nuclear ribonucleoprotein D2 polypeptide
LocusType gene with protein product
Status Approved
HGNC_id HGNC:11159
EnsembleID ENSG00000125743
Uniprot P62316

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SNRPD2 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SNRPD2 GO:0000245,GO:0000387,GO:0000387,GO:0000398,GO:0000398,GO:0000398,GO:0003723,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0005681,GO:0005681,GO:0005682,GO:0005682,GO:0005685,GO:0005685,GO:0005685,GO:0005685,GO:0005686,GO:0005686,GO:0005687,GO:0005687,GO:0005689,GO:0005829,GO:0005829,GO:0008380,GO:0030532,GO:0034709,GO:0034715,GO:0034715,GO:0034719,GO:0036261,GO:0046540,GO:0046540,GO:0046540,GO:0070062,GO:0071005,GO:0071007,GO:0071011,GO:0071013,GO:0071013,GO:1903241,GO:1990446

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
SNRPD2 hsa:6633 path:hsa03040 Spliceosome - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
EZH2 SNRPD2 23180781 24457600 physical association anti tag coimmunoprecipitation InnateDB
SUZ12 SNRPD2 23180781 24457600 physical association anti tag coimmunoprecipitation InnateDB
EED SNRPD2 23180781 24457600 physical association anti tag coimmunoprecipitation InnateDB
RNF2 SNRPD2 23180781 24457600 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
E2F4 SNRPD2 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
ETS1 SNRPD2 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 SNRPD2 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 SNRPD2 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
HIF1A SNRPD2 18971253 19828020 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
MITF SNRPD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 SNRPD2 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00001C3AC1 SNRPD2 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00005651EE SNRPD2 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00003CF1AD SNRPD2 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001C770D SNRPD2 23622248 25416803 mrna cleavage,inhibition clash TarBase

Source Target Pmid Interactiontype Methods Database
SNRPC SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 SNRPC 25361965 interaction type N/A PTMCode2
TXNL4A SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 TXNL4A 25361965 interaction type N/A PTMCode2
SNRPD1 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 SNRPD1 25361965 interaction type N/A PTMCode2
SNRPD2 DDX20 25361965 interaction type N/A PTMCode2
DDX20 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 CDC5L 25361965 interaction type N/A PTMCode2
CDC5L SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 SF3A3 25361965 interaction type N/A PTMCode2
SF3A3 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 PRPF4 25361965 interaction type N/A PTMCode2
PRPF4 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 CRNKL1 25361965 interaction type N/A PTMCode2
CRNKL1 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 SMN1 25361965 interaction type N/A PTMCode2
SMN1 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 SNRPE 25361965 interaction type N/A PTMCode2
SNRPE SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 LSM5 25361965 interaction type N/A PTMCode2
LSM5 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 LSM2 25361965 interaction type N/A PTMCode2
LSM2 SNRPD2 25361965 interaction type N/A PTMCode2
LSM6 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 LSM6 25361965 interaction type N/A PTMCode2
GEMIN7 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 GEMIN7 25361965 interaction type N/A PTMCode2
EFTUD2 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 EFTUD2 25361965 interaction type N/A PTMCode2
LSM8 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 LSM8 25361965 interaction type N/A PTMCode2
SF3B3 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 SF3B3 25361965 interaction type N/A PTMCode2
GEMIN5 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 GEMIN5 25361965 interaction type N/A PTMCode2
LSM7 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 LSM7 25361965 interaction type N/A PTMCode2
LSM3 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 LSM3 25361965 interaction type N/A PTMCode2
SF3A2 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 SF3A2 25361965 interaction type N/A PTMCode2
LSM1 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 LSM1 25361965 interaction type N/A PTMCode2
GEMIN4 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 GEMIN4 25361965 interaction type N/A PTMCode2
SNRPD3 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 SNRPD3 25361965 interaction type N/A PTMCode2
WDR77 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 WDR77 25361965 interaction type N/A PTMCode2
GEMIN6 SNRPD2 25361965 interaction type N/A PTMCode2
SNRPD2 GEMIN6 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
SF3A3 SNRPD2 25348397 N/A physical interaction ComPPI
MAPRE1 SNRPD2 25348397 N/A physical interaction ComPPI
SNRPB SNRPD2 18984161 19325628 24234451 25348397 physical association x-ray crystallography,physical interaction,ion exchange chromatography,comigration in non denaturing gel electrophoresis ComPPI,IntAct
SNW1 SNRPD2 25348397 N/A physical interaction ComPPI
CUL5 SNRPD2 25348397 N/A physical interaction ComPPI
CDC5L SNRPD2 25348397 N/A physical interaction ComPPI
SAP18 SNRPD2 25348397 N/A physical interaction ComPPI
IFIT3 SNRPD2 21642987 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
DHX15 SNRPD2 25348397 N/A physical interaction ComPPI
CD2BP2 SNRPD2 25348397 N/A physical interaction ComPPI
PPP1CC SNRPD2 25348397 N/A physical interaction ComPPI
NPM1 SNRPD2 25348397 N/A physical interaction ComPPI
SNRPA1 SNRPD2 25348397 N/A physical interaction ComPPI
SNRPF SNRPD2 11226169 14525934 22365833 24234451 25348397 9417867 physical association two hybrid,experimental interaction detection,physical interaction,two hybrid array,in vitro,two hybrid prey pooling approach,two hybrid ComPPI,HPRD,IntAct
LSM2 SNRPD2 14525934 14667819 15231747 22365833 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
UBL4A SNRPD2 25348397 N/A physical interaction ComPPI
SNRPG SNRPD2 25348397 N/A physical interaction ComPPI
CLNS1A SNRPD2 18984161 22365833 24234451 25348397 25416956 association,physical association anti bait coimmunoprecipitation,two hybrid,molecular sieving,physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
LSM6 SNRPD2 14525934 15231747 22365833 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
SNRPD1 SNRPD2 12975319 14525934 24234451 25348397 30021884 9417867 physical association two hybrid,cross-linking study,experimental interaction detection,physical interaction,in vivo ComPPI,HPRD,IntAct
LMNA SNRPD2 25348397 N/A physical interaction ComPPI
GABARAPL2 SNRPD2 20562859 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
U2AF1L5 SNRPD2 25348397 N/A physical interaction ComPPI
LSM1 SNRPD2 25348397 N/A physical interaction ComPPI
DCUN1D1 SNRPD2 25348397 N/A physical interaction ComPPI
KEAP1 SNRPD2 25348397 N/A physical interaction ComPPI
MCM2 SNRPD2 25348397 N/A physical interaction ComPPI
SF3B4 SNRPD2 25348397 N/A physical interaction ComPPI
SMN1 SNRPD2 10942426 14525934 19928837 21816274 24234451 25348397 9323129 association anti bait coimmunoprecipitation,experimental interaction detection,pull down,physical interaction,in vitro,in vivo ComPPI,HPRD,IntAct
GEMIN6 SNRPD2 11748230 14525934 15939020 24234451 25348397 N/A experimental interaction detection,pull down,physical interaction,in vitro ComPPI,HPRD,IntAct
GEMIN7 SNRPD2 12065586 14525934 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
LSM7 SNRPD2 25348397 N/A physical interaction ComPPI
DDX20 SNRPD2 10601333 14525934 25348397 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
EZH2 SNRPD2 25348397 N/A physical interaction ComPPI
SF3A2 SNRPD2 17332742 24234451 25348397 physical association affinity chromatography technology,physical interaction ComPPI,IntAct
SNRNP70 SNRPD2 24234451 25348397 26828962 association pull down,physical interaction ComPPI,IntAct
GRB2 SNRPD2 12577067 24234451 25348397 association pull down,physical interaction ComPPI,IntAct
JUN SNRPD2 24234451 25348397 25609649 association anti bait coimmunoprecipitation ComPPI,IntAct
COPS5 SNRPD2 25348397 N/A physical interaction ComPPI
SF3B1 SNRPD2 25348397 N/A physical interaction ComPPI
SFPQ SNRPD2 25348397 N/A physical interaction ComPPI
CUL3 SNRPD2 25348397 N/A physical interaction ComPPI
YBX1 SNRPD2 25348397 N/A physical interaction ComPPI
PTPN1 SNRPD2 25348397 N/A physical interaction ComPPI
RBM14 SNRPD2 25348397 N/A physical interaction ComPPI
MYC SNRPD2 21150319 24234451 25348397 association tandem affinity purification ComPPI,IntAct
DDX5 SNRPD2 25348397 N/A physical interaction ComPPI
STXBP3 SNRPD2 12065586 14525934 25348397 N/A experimental interaction detection,in vivo ComPPI,HPRD
PAFAH1B1 SNRPD2 25348397 N/A physical interaction ComPPI
HTATSF1 SNRPD2 25348397 N/A physical interaction ComPPI
GEMIN2 SNRPD2 11135666 14525934 18984161 21816274 24234451 25348397 association,physical association experimental interaction detection,molecular sieving,pull down,x-ray crystallography,in vitro ComPPI,HPRD,IntAct
CUL2 SNRPD2 25348397 N/A physical interaction ComPPI
CUL4B SNRPD2 25348397 N/A physical interaction ComPPI
ARRB2 SNRPD2 17620599 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SNRPD3 SNRPD2 25348397 N/A physical interaction ComPPI
STXBP2 SNRPD2 11748230 14525934 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
GEMIN5 SNRPD2 11714716 14525934 24234451 25348397 26496610 association anti tag coimmunoprecipitation,experimental interaction detection,physical interaction,in vitro ComPPI,HPRD,IntAct
WDR77 SNRPD2 11756452 14525934 25348397 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
CDK2 SNRPD2 25348397 N/A physical interaction ComPPI
CUL1 SNRPD2 25348397 N/A physical interaction ComPPI
EGFR SNRPD2 12577067 14525934 25348397 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
YWHAH SNRPD2 25348397 N/A physical interaction ComPPI
RNF2 SNRPD2 25348397 N/A physical interaction ComPPI
SF3A1 SNRPD2 25348397 N/A physical interaction ComPPI
MTREX SNRPD2 25348397 N/A physical interaction ComPPI
SUPT16H SNRPD2 25348397 N/A physical interaction ComPPI
NCSTN SNRPD2 25348397 N/A physical interaction ComPPI
GABARAP SNRPD2 20562859 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
STRAP SNRPD2 14525934 15848170 24234451 25348397 N/A experimental interaction detection,pull down,in vitro ComPPI,HPRD,IntAct
WWOX SNRPD2 25348397 N/A physical interaction ComPPI
VCAM1 SNRPD2 22623428 24234451 25348397 association cross-linking study,physical interaction ComPPI,IntAct
ITGA4 SNRPD2 25348397 N/A physical interaction ComPPI
EED SNRPD2 25348397 N/A physical interaction ComPPI
CUL7 SNRPD2 25348397 N/A physical interaction ComPPI
H3C1 SNRPD2 25348397 N/A physical interaction ComPPI
CAND1 SNRPD2 25348397 N/A physical interaction ComPPI
PRPF6 SNRPD2 25348397 N/A physical interaction ComPPI
SART3 SNRPD2 25348397 N/A physical interaction ComPPI
SMURF1 SNRPD2 25348397 N/A physical interaction ComPPI
SNRPD2 KAT5 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SNRPD2 EEF1G 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SNRPD2 DMTN 14525934 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SNRPD2 SNRPE 18984161 24234451 25348397 physical association physical interaction,comigration in non denaturing gel electrophoresis ComPPI,IntAct
SNRPD2 MEPCE 25348397 N/A physical interaction ComPPI
SNRPD2 SRRM2 25348397 N/A physical interaction ComPPI
SNRPD2 HNRNPA1 22446626 24234451 25348397 association pull down,physical interaction ComPPI,IntAct
SNRPD2 SF3B3 25348397 N/A physical interaction ComPPI
SNRPD2 PRPF8 25348397 N/A physical interaction ComPPI
SNRPD2 SF3B6 25348397 N/A physical interaction ComPPI
SNRPD2 SNRNP200 25348397 N/A physical interaction ComPPI
SNRPD2 U2AF1 25348397 N/A physical interaction ComPPI
SNRPD2 PRPF19 25348397 N/A physical interaction ComPPI
SNRPD2 PRPF3 25348397 N/A physical interaction ComPPI
SNRPD2 SART1 25348397 N/A physical interaction ComPPI
SNRPD2 LUC7L2 25348397 N/A physical interaction ComPPI
SNRPD2 MAGOH 25348397 N/A physical interaction ComPPI
SNRPD2 FN1 25348397 N/A physical interaction ComPPI
SNRPD2 ZCCHC10 22365833 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
SNRPD2 IFIT1 21642987 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SNRPD2 IFIT2 21642987 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SNRPD2 IL7R 25348397 N/A physical interaction ComPPI
SNRPD2 METTL18 25348397 N/A physical interaction ComPPI
SNRPD2 PAN2 25348397 N/A physical interaction ComPPI
SNRPD2 OS9 21988832 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
SNRPD2 AMOTL2 24234451 24255178 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SNRPD2 CRLF3 24234451 24255178 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SNRPD2 FUS 25348397 N/A physical interaction ComPPI
SNRPD2 CEP70 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
SNRPD2 SUZ12 25348397 N/A physical interaction ComPPI
SNRPD2 DDX23 25348397 N/A physical interaction ComPPI
SNRPD2 TSSC4 25348397 N/A physical interaction ComPPI
SNRPD2 SNRNP40 25348397 N/A physical interaction ComPPI
SNRPD2 PRPF31 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
SNRPD2 CHMP5 25348397 N/A physical interaction ComPPI
SNRPD2 CRNKL1 25348397 N/A physical interaction ComPPI
SNRPD2 LUC7L 25348397 N/A physical interaction ComPPI
SNRPD2 LUC7L3 25348397 N/A physical interaction ComPPI
SNRPD2 PLRG1 25348397 N/A physical interaction ComPPI
SNRPD2 SNRPGP15 25348397 N/A physical interaction ComPPI
SNRPD2 SRP14 25348397 N/A physical interaction ComPPI
SNRPD2 ZC3H18 24234451 25348397 29298432 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SNRPD2 RC3H1 25348397 N/A physical interaction ComPPI
SNRPD2 SNRPN 25348397 N/A physical interaction ComPPI
SNRPD2 PRPF4 25348397 N/A physical interaction ComPPI
SNRPD2 LSM5 25348397 N/A physical interaction ComPPI
SNRPD2 NCL 25348397 N/A physical interaction ComPPI
SNRPD2 CYLD 25348397 N/A physical interaction ComPPI
SNRPD2 EAPP 25348397 N/A physical interaction ComPPI
SNRPD2 AGO4 19167051 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
SNRPD2 GABARAPL1 20562859 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
SNRPD2 SPANXN2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SNRPD2 CINP 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SRRM1 SNRPD2 25348397 N/A physical interaction ComPPI
EIF4A3 SNRPD2 25348397 N/A physical interaction ComPPI
DDX41 SNRPD2 24234451 25348397 25920683 association anti tag coimmunoprecipitation ComPPI,IntAct
SNRPD2 SNRPD2 11756452 14525934 N/A experimental interaction detection HPRD
GEMIN4 SNRPD2 10725331 14525934 N/A experimental interaction detection HPRD
METTL14 SNRPD2 24234451 29507755 association anti tag coimmunoprecipitation IntAct
H2BC9 SNRPD2 24234451 30021884 physical association cross-linking study IntAct

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