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GENE：SOBP

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SOBP
FullNmae sine oculis binding protein homolog
LocusType gene with protein product
Status Approved
HGNC_id HGNC:29256
EnsembleID ENSG00000112320
Uniprot A7XYQ1

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SOBP immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SOBP GO:0005634,GO:0007605,GO:0007626,GO:0032184,GO:0042472,GO:0046872,GO:0048513,GO:0050890,GO:0090102

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR SOBP 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 SOBP 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 SOBP 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 SOBP 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 SOBP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SOBP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SOBP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SOBP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SOBP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 SOBP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SOBP 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SOBP 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000237AF9 SOBP 18185580 25416803 mrna cleavage,inhibition array technology TarBase
URS000005481D SOBP 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001925C1 SOBP 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000075AB35 SOBP 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000065D58 SOBP 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000005CF5F SOBP 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00002152A8 SOBP 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00001DE669 SOBP 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000036B845 SOBP 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000105D19 SOBP 24374217 25416803 mrna cleavage,inhibition clip TarBase
URS000015B295 SOBP 24374217 25416803 mrna cleavage,inhibition clip TarBase
URS0000284586 SOBP 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000041CB9C SOBP 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000006BE7D SOBP 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00002E92A8 SOBP 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000024B619 SOBP 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00001F9A0F SOBP 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00000939AF SOBP 19536157 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
CTBP1 SOBP 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
HNRNPL SOBP 25348397 N/A physical interaction ComPPI
SUMO2 SOBP 25348397 N/A physical interaction ComPPI

Visualization










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