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GENE：SUDS3

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SUDS3
FullNmae SDS3 homolog, SIN3A corepressor complex component
LocusType gene with protein product
Status Approved
HGNC_id HGNC:29545
EnsembleID ENSG00000111707
Uniprot Q9H7L9

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SUDS3 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SUDS3 GO:0000122,GO:0000122,GO:0000122,GO:0004407,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0005829,GO:0006338,GO:0006915,GO:0016580,GO:0016580,GO:0016604,GO:0019899,GO:0021762,GO:0030336,GO:0030512,GO:0042826,GO:0042826,GO:0045892,GO:0070822,GO:1902455,GO:1902459

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
SRPK1 SUDS3 23180781 23602568 phosphorylation reaction protein kinase assay InnateDB

Source Target Pmid Interactiontype Methods Database
E2F4 SUDS3 17531812 18971253 trascriptional regulation,stimulation chromatin immunoprecipitation array,inferred by curator TFlink
ETS1 SUDS3 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 SUDS3 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 SUDS3 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA3 SUDS3 21878914 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
PRDM14 SUDS3 18971253 20953172 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 SUDS3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SUDS3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SUDS3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 SUDS3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SUDS3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SUDS3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SUDS3 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 SUDS3 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000F4AC3 SUDS3 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000157026 SUDS3 23622248 25416803 mrna cleavage,inhibition clash TarBase

Source Target Pmid Interactiontype Methods Database
CDK2 SUDS3 22135298 phosphorylation N/A PhosphoSite

Source Target Pmid Interactiontype Methods Database
GOLGA2 SUDS3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LDOC1 SUDS3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
BRMS1 SUDS3 16919237 24234451 25348397 physical association anti bait coimmunoprecipitation,two hybrid,physical interaction ComPPI,IntAct
HCFC1 SUDS3 12670868 24234451 25348397 association,physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SIN3A SUDS3 25348397 N/A physical interaction ComPPI
CSNK2A1 SUDS3 22113938 24234451 25348397 phosphorylation reaction physical interaction,protein kinase assay ComPPI,IntAct
SRPK1 SUDS3 23602568 24234451 25348397 phosphorylation reaction physical interaction,protein kinase assay ComPPI,IntAct
CUL4B SUDS3 25348397 N/A physical interaction ComPPI
HDAC2 SUDS3 23752268 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
MXD1 SUDS3 25348397 N/A physical interaction ComPPI
MDC1 SUDS3 24234451 25348397 29656893 association proximity-dependent biotin identification ComPPI,IntAct
SAP30 SUDS3 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
SIN3B SUDS3 25348397 N/A physical interaction ComPPI
DDB1 SUDS3 25348397 N/A physical interaction ComPPI
SUDS3 SAP130 25348397 N/A physical interaction ComPPI
SUDS3 ARID4B 25348397 N/A physical interaction ComPPI
SUDS3 HDAC1 11909966 14525934 23752268 24234451 25348397 26496610 association anti tag coimmunoprecipitation,experimental interaction detection,physical interaction ComPPI,HPRD,IntAct
SUDS3 ING2 25348397 N/A physical interaction ComPPI
SUDS3 USP17L11 25348397 N/A physical interaction ComPPI
SUDS3 USP17L22 25348397 N/A physical interaction ComPPI
SUDS3 USP17L20 25348397 N/A physical interaction ComPPI
SUDS3 USP17L2 21239494 25348397 27898060 N/A physical interaction ComPPI,OmniPath
SUDS3 RBBP7 25348397 N/A physical interaction ComPPI
SUDS3 LACC1 25348397 N/A physical interaction ComPPI
SUDS3 AP5Z1 25348397 N/A physical interaction ComPPI
SUDS3 FOXK1 24234451 25348397 25609649 association physical interaction,tandem affinity purification ComPPI,IntAct
SUDS3 FOXK2 24234451 25348397 25609649 association physical interaction,tandem affinity purification ComPPI,IntAct
SUDS3 GATAD1 25348397 N/A physical interaction ComPPI
SUDS3 SINHCAF 25348397 N/A physical interaction ComPPI
SUDS3 ZNF704 25348397 N/A physical interaction ComPPI
SUDS3 MXD3 25348397 N/A physical interaction ComPPI
SUDS3 PHF23 25348397 N/A physical interaction ComPPI
SUDS3 LRRK2 24234451 24947832 25348397 N/A protein array ComPPI,IntAct
SUDS3 PPP1R16B 24234451 25348397 28330616 association pull down ComPPI,IntAct
AURKAIP1 SUDS3 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
MANF SUDS3 24234451 30021884 physical association cross-linking study IntAct
DYNLL2 SUDS3 24234451 30021884 physical association cross-linking study IntAct
CDK5R1 SUDS3 15489224 27898060 N/A N/A OmniPath

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