GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
TMEM248 |
FullNmae |
transmembrane protein 248 |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:25476 |
EnsembleID |
ENSG00000106609 |
Uniprot |
Q9NWD8 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
TMEM248 |
immunogenic |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
TMEM248 |
GO:0005515,GO:0016020 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
ETS1 |
TMEM248 |
18971253
20019798
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
GATA1 |
TMEM248 |
19941826
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
GATA2 |
TMEM248 |
18971253
19941826
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
SMARCA4 |
TMEM248 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
E2F4 |
TMEM248 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
FOS |
TMEM248 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
HNF4A |
TMEM248 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS000003ABC4 |
TMEM248 |
19088304
25416803
|
mrna cleavage,inhibition |
array technology |
TarBase |
URS0000170CF4 |
TMEM248 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS000075BDAA |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00003D8730 |
TMEM248 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000306C70 |
TMEM248 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000018CD09 |
TMEM248 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00000EEE35 |
TMEM248 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000006BE7D |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000183BED |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001CC864 |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000759B6A |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000010BD8D |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00000C48FA |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000160683 |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000024B619 |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001F9A0F |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00002FB065 |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000076E54 |
TMEM248 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
TAF1 |
TMEM248 |
25348397
|
N/A |
physical interaction |
ComPPI |
PKD2 |
TMEM248 |
25348397
|
N/A |
physical interaction |
ComPPI |
RRM2 |
TMEM248 |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
BARD1 |
TMEM248 |
25348397
|
N/A |
physical interaction |
ComPPI |
GRM2 |
TMEM248 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
SSH3 |
TMEM248 |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
UQCRQ |
TMEM248 |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
UBFD1 |
TMEM248 |
25348397
|
N/A |
physical interaction |
ComPPI |
TSPAN5 |
TMEM248 |
25348397
|
N/A |
physical interaction |
ComPPI |
TMEM248 |
MAL |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
Visualization