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GENE：VAMP4

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol VAMP4
FullNmae vesicle associated membrane protein 4
LocusType gene with protein product
Status Approved
HGNC_id HGNC:12645
EnsembleID ENSG00000117533
Uniprot O75379

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
VAMP4 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
VAMP4 GO:0000139,GO:0005515,GO:0005764,GO:0005768,GO:0005794,GO:0005802,GO:0005886,GO:0009986,GO:0016189,GO:0030133,GO:0030669,GO:0031201,GO:0032456,GO:0032588,GO:0035493,GO:0035493,GO:0090161,GO:1900242

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
VAMP4 hsa:8674 path:hsa04130 SNARE interactions in vesicular transport - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR VAMP4 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 VAMP4 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA2 VAMP4 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
NR1I2 VAMP4 19129222 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 VAMP4 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 VAMP4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF VAMP4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 VAMP4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 VAMP4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 VAMP4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS VAMP4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 VAMP4 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A VAMP4 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000427B68 VAMP4 21572407 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000451A1 VAMP4 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00004719AB VAMP4 21572407 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002F5FEE VAMP4 21572407 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000ECE9C VAMP4 21572407 24906430 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00000B7E30 VAMP4 21572407 24906430 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS00001CF056 VAMP4 24906430 25416803 27418678 mrna cleavage,inhibition clip TarBase
URS000055128B VAMP4 24906430 25416803 27418678 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
CSNK2A1 VAMP4 25361965 interaction type N/A PTMCode2
VAMP4 CSNK2A1 25361965 interaction type N/A PTMCode2
VAMP4 STX4 25361965 interaction type N/A PTMCode2
STX4 VAMP4 25361965 interaction type N/A PTMCode2
VAMP4 STX2 25361965 interaction type N/A PTMCode2
STX2 VAMP4 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
STX11 VAMP4 25348397 N/A physical interaction ComPPI
SNAP29 VAMP4 25348397 N/A physical interaction ComPPI
STX12 VAMP4 17159904 24234451 25348397 association,physical association circular dichroism,molecular sieving,x-ray crystallography,physical interaction,comigration in non denaturing gel electrophoresis ComPPI,IntAct
LMNA VAMP4 24234451 25348397 30021884 physical association cross-linking study,physical interaction ComPPI,IntAct
KASH5 VAMP4 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
PACS1 VAMP4 14525934 14608369 25348397 N/A experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD
AP1M1 VAMP4 11598115 14525934 14608369 25348397 27898060 N/A two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid ComPPI,HPRD,OmniPath
PLK1 VAMP4 25348397 N/A physical interaction ComPPI
CSNK2A1 VAMP4 14525934 14608369 15345747 25348397 N/A experimental interaction detection,physical interaction,in vitro ComPPI,HPRD
SNAP23 VAMP4 25348397 N/A physical interaction ComPPI
STX4 VAMP4 14525934 16189514 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,validated two hybrid,two hybrid ComPPI,HPRD,IntAct
STX1A VAMP4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
AP1B1 VAMP4 23415225 24234451 25348397 association pull down ComPPI,IntAct
NAPA VAMP4 25348397 N/A physical interaction ComPPI
STX8 VAMP4 19557002 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
STX7 VAMP4 19557002 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
STX3 VAMP4 25348397 N/A physical interaction ComPPI
EBP VAMP4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
BNIP1 VAMP4 25348397 N/A physical interaction ComPPI
SYT2 VAMP4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
STX5 VAMP4 25348397 N/A physical interaction ComPPI
CLINT1 VAMP4 25348397 N/A physical interaction ComPPI
GOSR1 VAMP4 25348397 N/A physical interaction ComPPI
TGOLN2 VAMP4 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
STX6 VAMP4 10359608 11839770 14525934 19557002 24234451 25348397 25419848 27898060 association,physical association anti tag coimmunoprecipitation,experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD,IntAct,OmniPath
GOSR2 VAMP4 25348397 N/A physical interaction ComPPI
SCFD1 VAMP4 25348397 N/A physical interaction ComPPI
VTI1B VAMP4 25348397 N/A physical interaction ComPPI
VAMP4 STX16 11839770 14525934 25348397 N/A experimental interaction detection,physical interaction,in vivo ComPPI,HPRD
VAMP4 VTI1A 25348397 N/A physical interaction ComPPI
VAMP4 VPS53 25348397 N/A physical interaction ComPPI
VAMP4 VPS52 25348397 N/A physical interaction ComPPI
VAMP4 BCL2L13 25348397 N/A physical interaction ComPPI
VAMP4 CLEC12A 25348397 N/A physical interaction ComPPI
VAMP4 NAPG 25348397 N/A physical interaction ComPPI
VAMP4 STX18 25348397 N/A physical interaction ComPPI
VAMP4 TMEM17 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
VAMP4 ZNF526 25348397 N/A physical interaction ComPPI
VAMP4 NTMT1 25348397 N/A physical interaction ComPPI
VAMP4 NAPB 25348397 N/A physical interaction ComPPI
VAMP4 NBAS 25348397 N/A physical interaction ComPPI
VAMP4 MBLAC2 25348397 N/A physical interaction ComPPI
VAMP4 COX6B1 25348397 N/A physical interaction ComPPI
VAMP4 SCFD2 25348397 N/A physical interaction ComPPI
VAMP4 USE1 25348397 N/A physical interaction ComPPI
VAMP4 STX10 25348397 N/A physical interaction ComPPI
VAMP4 OXSM 25348397 N/A physical interaction ComPPI
VAMP4 VPS45 25348397 N/A physical interaction ComPPI
VAMP4 ZW10 25348397 N/A physical interaction ComPPI
VAMP4 GALM 25348397 N/A physical interaction ComPPI
VAMP4 CZIB 25348397 N/A physical interaction ComPPI
VAMP4 VPS51 25348397 N/A two hybrid,physical interaction ComPPI
VAMP4 VPS50 24234451 25348397 25799061 association pull down,physical interaction ComPPI,IntAct
VAMP4 SCAMP5 19234194 24234451 25348397 association anti tag coimmunoprecipitation ComPPI,IntAct
VAMP4 AP1S3 23415225 24234451 25348397 association pull down ComPPI,IntAct
VAMP4 SNAP47 24234451 25348397 26359495 physical association anti tag coimmunoprecipitation ComPPI,IntAct
VAMP4 SAR1A 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 PTGES 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 REEP4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 ERGIC3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 SEC11C 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 FAM210B 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 CISD2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 RETREG3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 ANKS6 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 TMEM205 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 GPX8 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 CPLX4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 ARL13B 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 SLC10A6 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 GPR152 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 LDLRAD1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 TM4SF19 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 FAM209A 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 SSMEM1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 CYB5R3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 AQP6 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 ELOVL4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 STOM 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 TMX2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 LEUTX 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
MGST3 VAMP4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TMEM51 VAMP4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
MTIF3 VAMP4 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VAMP4 DNAJC5 24234451 29997244 physical association bioluminescence resonance energy transfer IntAct
TOP2B VAMP4 24234451 30021884 physical association cross-linking study IntAct
CSNK2A1 VAMP4 14608369 15345747 18452278 18578522 18669648 18691976 19651622 19664994 20058876 20068231 20166139 27898060 stimulant N/A OmniPath
SYK VAMP4 14608369 27898060 N/A N/A OmniPath

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