Gene Information gene info

  1. Home

GENE：RNF40

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RNF40
FullNmae ring finger protein 40
LocusType gene with protein product
Status Approved
HGNC_id HGNC:16867
EnsembleID ENSG00000103549
Uniprot O75150

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RNF40 mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
RNF40 ferroptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
RNF40 GO:0000151,GO:0003730,GO:0004842,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0005654,GO:0006325,GO:0006511,GO:0016020,GO:0016567,GO:0031625,GO:0033503,GO:0033503,GO:0042803,GO:0043005,GO:0045944,GO:0046872,GO:0061630,GO:0071894

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 RNF40 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
TP53 RNF40 18922183 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 RNF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA RNF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF RNF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 RNF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 RNF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS RNF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A RNF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF RNF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink
VDR RNF40 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000EED18 RNF40 21566225 25416803 mrna cleavage,inhibition experimental interaction detection TarBase
URS0000324096 RNF40 18668040 25416803 mrna cleavage,inhibition experimental interaction detection TarBase
URS00004E008F RNF40 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001597DC RNF40 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000021D7C8 RNF40 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000018D2BE RNF40 19536157 23706177 25416803 mrna cleavage,inhibition clip TarBase
URS00002971AB RNF40 23706177 25416803 mrna cleavage,inhibition clip TarBase
URS00006DE17B RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000060AABB RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000568FF8 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002E0524 RNF40 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS000024A59E RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002367FA RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001C3AC1 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002004E0 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000045ED38 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000027F5F3 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000759B6A RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00003E5ECC RNF40 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS00004E02F2 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000020579D RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000047A8F RNF40 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS00001F373E RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000ECE9C RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000214763 RNF40 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS000039607D RNF40 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS0000076E54 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00003D5391 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000049FAE8 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075BDA4 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002B0B46 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005E1A16 RNF40 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002E728C RNF40 25416803 26701625 27292025 mrna cleavage,inhibition clip TarBase
URS0000184017 RNF40 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00001B341F RNF40 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00005ECFE5 RNF40 25416803 27292025 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
ATM RNF40 22135298 phosphorylation N/A PhosphoSite
RNF40 RNF20 25361965 interaction type N/A PTMCode2
RNF20 RNF40 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
ZNF232 RNF40 25348397 N/A physical interaction ComPPI
UBE2I RNF40 25348397 N/A physical interaction ComPPI
CDC73 RNF40 25348397 N/A physical interaction ComPPI
WASHC3 RNF40 25348397 N/A physical interaction ComPPI
RNF40 RB1 10944455 14525934 24234451 25348397 27898060 physical association anti tag coimmunoprecipitation,two hybrid,experimental interaction detection,physical interaction,in vitro,in vivo ComPPI,HPRD,IntAct,OmniPath
RNF40 UBE2L6 12121982 14525934 25348397 N/A experimental interaction detection,physical interaction,in vivo ComPPI,HPRD
RNF40 NCBP1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,two hybrid ComPPI,HPRD,IntAct
RNF40 TRIM51 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RNF40 ZNF451 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RNF40 STX1A 25348397 N/A physical interaction ComPPI
RNF40 USP15 19615732 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RNF40 RNF20 16307923 19410543 24234451 25348397 ubiquitination reaction,physical association anti tag coimmunoprecipitation,molecular sieving,chromatography technology,physical interaction,enzymatic study ComPPI,IntAct
RNF40 WAC 25348397 N/A physical interaction ComPPI
RNF40 TERF1 25348397 N/A physical interaction ComPPI
RNF40 TERF2 25348397 N/A physical interaction ComPPI
RNF40 AR 25348397 N/A physical interaction ComPPI
RNF40 ATM 25348397 N/A physical interaction ComPPI
RNF40 ITSN1 25348397 N/A physical interaction ComPPI
RNF40 H2BC21 25348397 N/A physical interaction ComPPI
RNF40 RNF40 24234451 25348397 25416956 physical association physical interaction,two hybrid array ComPPI,IntAct
RNF40 UBE2E1 25348397 N/A physical interaction ComPPI
RNF40 NOTCH1 23022380 24234451 25348397 association physical interaction,tandem affinity purification ComPPI,IntAct
RNF40 HSP90AA1 25348397 N/A physical interaction ComPPI
RNF40 HSP90AA2P 25348397 N/A physical interaction ComPPI
RNF40 UBE2A 19410543 24234451 25348397 association pull down,physical interaction ComPPI,IntAct
RNF40 MSL1 25348397 N/A physical interaction ComPPI
RNF40 MSL2 25348397 N/A physical interaction ComPPI
RNF40 PAF1 25348397 N/A physical interaction ComPPI
RNF40 CDK9 25348397 N/A physical interaction ComPPI
RNF40 UBE2B 19410543 24234451 25348397 association pull down,physical interaction ComPPI,IntAct
RNF40 AMOTL2 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RNF40 CCDC146 25348397 N/A physical interaction ComPPI
RNF40 SFR1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RNF40 NXF1 25348397 N/A physical interaction ComPPI
RNF40 SIRT6 25348397 N/A physical interaction ComPPI
RNF40 OIP5 25348397 N/A physical interaction ComPPI
RNF40 SNAP29 25348397 N/A physical interaction ComPPI
RNF40 MORC1 25348397 N/A physical interaction ComPPI
RNF40 FCGR3A 25348397 N/A physical interaction ComPPI
RNF40 TALDO1 25348397 N/A physical interaction ComPPI
RNF40 TRABD 25348397 N/A physical interaction ComPPI
RNF40 MBIP 25348397 N/A physical interaction ComPPI
RNF40 DSN1 25348397 N/A physical interaction ComPPI
RNF40 PLEKHO2 25348397 N/A physical interaction ComPPI
RNF40 BORCS6 25348397 N/A physical interaction ComPPI
RNF40 WNT4 25348397 N/A physical interaction ComPPI
RNF40 IL36A 25348397 N/A physical interaction ComPPI
RNF40 IER2 25348397 N/A physical interaction ComPPI
RNF40 PLCG1 25348397 N/A physical interaction ComPPI
RNF40 CIAPIN1 25348397 N/A physical interaction ComPPI
RNF40 CMTR1 25348397 N/A physical interaction ComPPI
RNF40 SEPTIN2 25348397 N/A physical interaction ComPPI
RNF40 SNX2 25348397 N/A physical interaction ComPPI
RNF40 TXNDC5 25348397 N/A physical interaction ComPPI
RNF40 WDR61 25348397 N/A physical interaction ComPPI
RNF40 XPNPEP1 25348397 N/A physical interaction ComPPI
RNF40 NTRK1 25348397 N/A physical interaction ComPPI
RNF40 ESR1 25348397 N/A physical interaction ComPPI
RNF40 SUPT6H 25348397 N/A physical interaction ComPPI
RNF40 EWSR1 25348397 N/A physical interaction ComPPI
RNF40 HSPA5 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RNF40 UBE2S 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RNF40 IWS1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RNF40 KLC3 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RNF40 GTF2H5 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
RNF40 KIF11 25348397 N/A physical interaction ComPPI
RNF40 TRAIP 25348397 N/A physical interaction ComPPI
RNF40 TCP10L 25348397 N/A physical interaction ComPPI
RNF40 OLFM2 25348397 N/A physical interaction ComPPI
RNF40 COG6 25348397 N/A physical interaction ComPPI
RNF40 HNRNPLL 25348397 N/A physical interaction ComPPI
RNF40 TEX13A 25348397 N/A physical interaction ComPPI
RNF40 MED21 25348397 N/A physical interaction ComPPI
RNF40 INSYN2A 25348397 N/A physical interaction ComPPI
RNF40 SNX32 25348397 N/A physical interaction ComPPI
RNF40 NELL2 25348397 N/A physical interaction ComPPI
RNF40 NUP58 25348397 N/A physical interaction ComPPI
RNF40 MTNR1B 24234451 25348397 26514267 physical association two hybrid,physical interaction ComPPI,IntAct
RNF40 FBXL19 25348397 N/A physical interaction ComPPI
RNF40 CENPO 19447967 24234451 25348397 physical association two hybrid pooling approach,two hybrid fragment pooling approach ComPPI,IntAct
RNF40 TP53 19410543 24234451 25348397 association pull down ComPPI,IntAct
RNF40 HSP90AB1 22939624 24234451 25348397 physical association luminescence based mammalian interactome mapping ComPPI,IntAct
RNF40 HTT 17500595 24234451 25348397 physical association two hybrid ComPPI,IntAct
RNF40 DUSP29 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RNF40 ZCCHC12 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RNF40 CDK8 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
RNF40 PSMC3 24234451 30021884 physical association cross-linking study IntAct
UQCRHL RNF40 24234451 30021884 physical association cross-linking study IntAct
ATM RNF40 21362549 21763684 27898060 stimulant N/A OmniPath
RNF40 RNF20 16307923 19410543 21329877 21362549 22155569 24441044 25533843 27898060 stimulant N/A OmniPath
RNF20 RNF40 16307923 19410543 21329877 21362549 22155569 24441044 25533843 27898060 stimulant N/A OmniPath

Visualization










  Return