GeneInfo:
GeneAttribute
GeneDescription
GeneSymbol
AP4S1
FullNmae
adaptor related protein complex 4 subunit sigma 1
LocusType
gene with protein product
Status
Approved
HGNC_id
HGNC:575
EnsembleID
ENSG00000100478
Uniprot
Q9Y587
Protein Structure:
Gene Description in Publicaton:
GeneSymbol
CellDeathType
PMID
Description
GeneType
AP4S1
lysosomal_cd
36341760
220 lysosome-dependent cell death genes.
retulator signature
AP4S1
lysosomal_cd
36341760
The PCD-related genes contained the key regulatory genes of twelve PCD patterns which is mentioned above. Genes were collected from GSEA gene sets, KEGG, review articles, and manual collation [10]. The ultimate gene list was the concatenation regulatory genes of twelve PCD patterns.
regulator signature
AP4S1
ferroptosis
38538696
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore)
retulator signature
Go Annotation:
GeneSymbol
Go id
AP4S1
GO:0005802,GO:0006605,GO:0008104,GO:0016192,GO:0016192,GO:0030124,GO:0030124,GO:0031904,GO:0032588,GO:0043231,GO:0043231
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source
Target
Pmid
Interactiontype
Methods
Database
AR
AP4S1
20610535
trascriptional regulation,stimulation
chromatin immunoprecipitation array
TFlink
ETS1
AP4S1
18971253
20019798
trascriptional regulation,stimulation
inferred by curator,chromatin immunoprecipitation assay
TFlink
SMARCA4
AP4S1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
CEBPA
AP4S1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
CTCF
AP4S1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
EGR1
AP4S1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
FOXA1
AP4S1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
FOS
AP4S1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
GATA2
AP4S1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
HNF4A
AP4S1
18971253
trascriptional regulation,stimulation
inferred by curator
TFlink
Source
Target
Pmid
Interactiontype
Methods
Database
URS000041CB9C
AP4S1
23622248
25416803
mrna cleavage,inhibition
clash
TarBase
URS00000ECE9C
AP4S1
22012620
25416803
mrna cleavage,inhibition
clip
TarBase
URS00000BA274
AP4S1
22012620
25416803
mrna cleavage,inhibition
clip
TarBase
Source
Target
Pmid
Interactiontype
Methods
Database
CDC73
AP4S1
24234451
25348397
26496610
association
anti tag coimmunoprecipitation,physical interaction
ComPPI,IntAct
APPBP2
AP4S1
24234451
25348397
26496610
association
anti tag coimmunoprecipitation,physical interaction
ComPPI,IntAct
RPL10
AP4S1
25348397
N/A
physical interaction
ComPPI
GRB2
AP4S1
18624398
24234451
25348397
physical association
two hybrid,physical interaction
ComPPI,IntAct
GTF2I
AP4S1
21988832
24234451
25348397
physical association
two hybrid,physical interaction,two hybrid array
ComPPI,IntAct
SLC9A1
AP4S1
24234451
25348397
26496610
association
anti tag coimmunoprecipitation,physical interaction
ComPPI,IntAct
TMPO
AP4S1
25348397
N/A
physical interaction
ComPPI
MECP2
AP4S1
25348397
N/A
physical interaction
ComPPI
TGOLN2
AP4S1
24234451
25348397
29568061
association
proximity-dependent biotin identification
ComPPI,IntAct
HLTF
AP4S1
24234451
25348397
26496610
association
anti tag coimmunoprecipitation,physical interaction
ComPPI,IntAct
AP4E1
AP4S1
24234451
25348397
26496610
association
anti tag coimmunoprecipitation,physical interaction
ComPPI,IntAct
SUV39H2
AP4S1
25348397
N/A
physical interaction
ComPPI
AFP
AP4S1
21988832
24234451
25348397
physical association
two hybrid,physical interaction,two hybrid array
ComPPI,IntAct
APP
AP4S1
25348397
N/A
physical interaction
ComPPI
TMPO
AP4S1
24234451
25348397
26496610
association
anti tag coimmunoprecipitation,physical interaction
ComPPI,IntAct
HTR6
AP4S1
24234451
28298427
physical association
ubiquitin reconstruction
IntAct
Visualization