GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
PEX6 |
FullNmae |
peroxisomal biogenesis factor 6 |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:8859 |
EnsembleID |
ENSG00000124587 |
Uniprot |
Q13608 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
PEX6 |
ferroptosis |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
PEX6 |
GO:0001750,GO:0005515,GO:0005524,GO:0005737,GO:0005777,GO:0005778,GO:0005778,GO:0005829,GO:0005829,GO:0005829,GO:0006625,GO:0007031,GO:0016558,GO:0016561,GO:0016562,GO:0016887,GO:0016887,GO:0043335,GO:0044877,GO:0050821,GO:0097733,GO:0140036,GO:0140318 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
ETS1 |
PEX6 |
18971253
20019798
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
YBX1 |
PEX6 |
19151767
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
SMARCA4 |
PEX6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CEBPA |
PEX6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CTCF |
PEX6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
E2F4 |
PEX6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
EGR1 |
PEX6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
FOS |
PEX6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
HNF4A |
PEX6 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
SMAD3 |
PEX6 |
N/A
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS00001C770D |
PEX6 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS0000031E12 |
PEX6 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS0000324096 |
PEX6 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS0000553F51 |
PEX6 |
23592263
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000334286 |
PEX6 |
23592263
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001CE046 |
PEX6 |
23592263
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00005586D0 |
PEX6 |
23592263
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
PEX6 |
PEX26 |
25361965
|
interaction type |
N/A |
PTMCode2 |
PEX26 |
PEX6 |
25361965
|
interaction type |
N/A |
PTMCode2 |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
PSMC3 |
PEX6 |
25348397
|
N/A |
physical interaction |
ComPPI |
SMAD3 |
PEX6 |
14525934
14651998
25348397
|
N/A |
two hybrid,experimental interaction detection,in vitro,two hybrid |
ComPPI,HPRD |
THBS3 |
PEX6 |
25348397
|
N/A |
physical interaction |
ComPPI |
CERS2 |
PEX6 |
21988832
24234451
25348397
|
physical association |
two hybrid,physical interaction,two hybrid array |
ComPPI,IntAct |
ENSA |
PEX6 |
25348397
|
N/A |
physical interaction |
ComPPI |
CD79A |
PEX6 |
25348397
|
N/A |
physical interaction |
ComPPI |
PEX1 |
PEX6 |
14525934
15634331
16007078
16911527
22500805
22710083
22940862
24234451
25348397
25659908
26066397
27898060
9588209
9671729
|
physical association |
anti bait coimmunoprecipitation,two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid |
ComPPI,HPRD,IntAct,OmniPath |
PEX6 |
PEX26 |
12717447
14525934
16257970
24234451
25348397
|
association |
anti tag coimmunoprecipitation,experimental interaction detection,physical interaction,in vitro,in vivo |
ComPPI,HPRD,IntAct |
PEX6 |
RPL27A |
21988832
24234451
25348397
|
physical association |
two hybrid,physical interaction,two hybrid array |
ComPPI,IntAct |
PEX6 |
TMEM25 |
25348397
|
N/A |
physical interaction |
ComPPI |
PEX6 |
THBS4 |
25348397
|
N/A |
physical interaction |
ComPPI |
PEX6 |
DKKL1 |
25348397
|
N/A |
physical interaction |
ComPPI |
PEX6 |
KBTBD4 |
25348397
|
N/A |
physical interaction |
ComPPI |
PEX6 |
IMPDH1 |
25348397
|
N/A |
physical interaction |
ComPPI |
PEX6 |
OLFM2 |
25348397
|
N/A |
physical interaction |
ComPPI |
PEX6 |
LNX1 |
25348397
|
N/A |
physical interaction |
ComPPI |
PEX6 |
ATF7IP |
14525934
15231748
24234451
25348397
|
physical association |
two hybrid,two hybrid |
ComPPI,HPRD,IntAct |
RPS14 |
PEX6 |
21988832
24234451
25348397
|
physical association |
two hybrid,physical interaction,two hybrid array |
ComPPI,IntAct |
Visualization