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GENE：SYF2

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SYF2
FullNmae SYF2 pre-mRNA splicing factor
LocusType gene with protein product
Status Approved
HGNC_id HGNC:19824
EnsembleID ENSG00000117614
Uniprot O95926

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SYF2 parthanatos 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SYF2 mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
SYF2 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SYF2 GO:0000398,GO:0000398,GO:0000974,GO:0001701,GO:0003723,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0007095,GO:0007369,GO:0008284,GO:0016607,GO:0048568,GO:0071007,GO:0071013,GO:0071013,GO:0071014

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
SYF2 hsa:25949 path:hsa03040 Spliceosome - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 SYF2 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 SYF2 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 SYF2 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 SYF2 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 SYF2 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00003CF1AD SYF2 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000324096 SYF2 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00002F8148 SYF2 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000122ED0 SYF2 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00003BD367 SYF2 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS0000427B68 SYF2 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00001B9F58 SYF2 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS00001FFA8C SYF2 21572407 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
BCAS2 SYF2 25348397 N/A physical interaction ComPPI
SNW1 SYF2 25348397 N/A physical interaction ComPPI
CDC5L SYF2 25348397 N/A physical interaction ComPPI
YJU2 SYF2 25348397 N/A physical interaction ComPPI
SNRPA1 SYF2 25348397 N/A physical interaction ComPPI
VCP SYF2 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
WDR83 SYF2 25348397 N/A physical interaction ComPPI
CCNDBP1 SYF2 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
XAB2 SYF2 25348397 N/A physical interaction ComPPI
MCM3 SYF2 25348397 N/A physical interaction ComPPI
DVL3 SYF2 25348397 N/A physical interaction ComPPI
TRA2A SYF2 25348397 N/A physical interaction ComPPI
PLRG1 SYF2 25348397 N/A physical interaction ComPPI
CDC40 SYF2 25348397 N/A physical interaction ComPPI
BTBD1 SYF2 25348397 N/A physical interaction ComPPI
PRPF19 SYF2 25348397 N/A physical interaction ComPPI
SNRPE SYF2 25348397 N/A physical interaction ComPPI
SNRPN SYF2 25348397 N/A physical interaction ComPPI
POU5F1 SYF2 25348397 N/A physical interaction ComPPI
TSSC4 SYF2 25348397 N/A physical interaction ComPPI
CRNKL1 SYF2 25348397 N/A physical interaction ComPPI
ELAVL2 SYF2 25348397 N/A physical interaction ComPPI
APP SYF2 25348397 N/A physical interaction ComPPI
DHX8 SYF2 25348397 N/A physical interaction ComPPI
AQR SYF2 25348397 N/A physical interaction ComPPI
ZC3H18 SYF2 25348397 N/A physical interaction ComPPI
NANOG SYF2 25348397 N/A physical interaction ComPPI
SYF2 CWF19L2 25348397 N/A physical interaction ComPPI
SYF2 ISY1 25348397 N/A physical interaction ComPPI
SYF2 RBM22 25348397 N/A physical interaction ComPPI
SYF2 NKAPD1 25348397 N/A physical interaction ComPPI
SYF2 BUD31 25348397 N/A physical interaction ComPPI

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