GENE:CLSPN
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | CLSPN |
| FullNmae | claspin |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:19715 |
| EnsembleID | ENSG00000092853 |
| Uniprot | Q9HAW4 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| CLSPN | parthanatos | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
| CLSPN | mitotic_cd | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| CLSPN | GO:0000076,GO:0000077,GO:0000217,GO:0005515,GO:0005634,GO:0005654,GO:0005654,GO:0005794,GO:0006281,GO:0007095,GO:0007095,GO:0010997,GO:0010997,GO:0018105,GO:0032147,GO:0032147,GO:0033314,GO:0033314 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| ETS1 | CLSPN | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| YBX1 | CLSPN | 19151767 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| SMARCA4 | CLSPN | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | CLSPN | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| E2F4 | CLSPN | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | CLSPN | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOS | CLSPN | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| GATA2 | CLSPN | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | CLSPN | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TAL1 | CLSPN | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| ZNF263 | CLSPN | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS0000521626 | CLSPN | 17612493 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS00003380CC | CLSPN | 17612493 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS00000F31F4 | CLSPN | 19074876 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS00000B59A2 | CLSPN | 19074876 25416803 | mrna cleavage,inhibition | array technology | TarBase |
| URS00000BE495 | CLSPN | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
| URS00003D5391 | CLSPN | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
| URS00000C85B2 | CLSPN | 23622248 25416803 | mrna cleavage,inhibition | clash | TarBase |
| URS0000065FDF | CLSPN | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000075A760 | CLSPN | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002152A8 | CLSPN | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000023F008 | CLSPN | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001C770D | CLSPN | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000AB32B | CLSPN | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00004F2EB0 | CLSPN | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00001496AE | CLSPN | 23592263 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002E1509 | CLSPN | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000007D64A | CLSPN | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000F0F49 | CLSPN | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000040EE1D | CLSPN | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000041CB9C | CLSPN | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000171CD1 | CLSPN | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00002E628F | CLSPN | 21572407 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000032FC1A | CLSPN | 20371350 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS00005C1F22 | CLSPN | 20371350 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00000C5BAA | CLSPN | 20371350 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000076995 | CLSPN | 20371350 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000003575B | CLSPN | 20371350 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS00005D986D | CLSPN | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000508C13 | CLSPN | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS0000045DBD | CLSPN | 23824327 25416803 | mrna cleavage,inhibition | clip | TarBase |
| URS000035AC91 | CLSPN | 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS00002FF522 | CLSPN | 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS000075C1E1 | CLSPN | 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| URS00004E008F | CLSPN | 25416803 27418678 | mrna cleavage,inhibition | clip | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| CHEK1 | CLSPN | 22135298 | phosphorylation | N/A | PhosphoSite |
| CDC7 | CLSPN | 22135298 | phosphorylation | N/A | PhosphoSite |
| PLK1 | CLSPN | 22135298 25361965 | interaction type,phosphorylation | N/A | PhosphoSite,PTMCode2 |
| CLSPN | PLK1 | 25361965 | interaction type | N/A | PTMCode2 |
| RAD9A | CLSPN | 25361965 | interaction type | N/A | PTMCode2 |
| CLSPN | RAD9A | 25361965 | interaction type | N/A | PTMCode2 |
| USP28 | CLSPN | 25361965 | interaction type | N/A | PTMCode2 |
| CLSPN | USP28 | 25361965 | interaction type | N/A | PTMCode2 |
| CASP7 | CLSPN | 25361965 | interaction type | N/A | PTMCode2 |
| CLSPN | CASP7 | 25361965 | interaction type | N/A | PTMCode2 |
| CLSPN | USP7 | 25361965 | interaction type | N/A | PTMCode2 |
| USP7 | CLSPN | 25361965 | interaction type | N/A | PTMCode2 |
| CLSPN | ATR | 25361965 | interaction type | N/A | PTMCode2 |
| ATR | CLSPN | 25361965 | interaction type | N/A | PTMCode2 |
| CLSPN | BRCA1 | 25361965 | interaction type | N/A | PTMCode2 |
| BRCA1 | CLSPN | 25361965 | interaction type | N/A | PTMCode2 |
| CLSPN | BTRC | 25361965 | interaction type | N/A | PTMCode2 |
| BTRC | CLSPN | 25361965 | interaction type | N/A | PTMCode2 |
| CLSPN | PCNA | 25361965 | interaction type | N/A | PTMCode2 |
| PCNA | CLSPN | 25361965 | interaction type | N/A | PTMCode2 |
| CLSPN | RAD17 | 25361965 | interaction type | N/A | PTMCode2 |
| RAD17 | CLSPN | 25361965 | interaction type | N/A | PTMCode2 |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| USP20 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| PCNA | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| MYH7 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| EGLN3 | CLSPN | 24234451 25348397 26972000 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| ATR | CLSPN | 12766152 14525934 25348397 | N/A | experimental interaction detection,physical interaction,in vitro,in vivo | ComPPI,HPRD |
| USP7 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| FZR1 | CLSPN | 18662541 24234451 25348397 | physical association | anti tag coimmunoprecipitation,pull down,physical interaction | ComPPI,IntAct |
| BTRC | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| RPA1 | CLSPN | 24126761 24234451 25348397 | association | tandem affinity purification | ComPPI,IntAct |
| RAD9A | CLSPN | 12766152 14525934 20424596 24234451 25348397 | physical association | anti bait coimmunoprecipitation,experimental interaction detection,physical interaction,in vitro,in vivo | ComPPI,HPRD,IntAct |
| MSH6 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| PLK1 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| CASP7 | CLSPN | 14525934 16123041 25348397 | N/A | experimental interaction detection,physical interaction,in vitro | ComPPI,HPRD |
| XPO1 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| RPA2 | CLSPN | 24126761 24234451 25348397 | association | tandem affinity purification | ComPPI,IntAct |
| RPA3 | CLSPN | 24126761 24234451 25348397 | association | tandem affinity purification | ComPPI,IntAct |
| CHEK1 | CLSPN | 12766152 14525934 16123041 16963448 24234451 25348397 | phosphorylation reaction,physical association | anti tag coimmunoprecipitation,experimental interaction detection,pull down,physical interaction,protein kinase assay,in vitro,in vivo | ComPPI,HPRD,IntAct |
| CDC20 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| CDK9 | CLSPN | 20930849 24234451 25348397 | association,physical association | anti bait coimmunoprecipitation,anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| CDC45 | CLSPN | 23910567 24234451 25348397 | association,physical association | anti bait coimmunoprecipitation,pull down | ComPPI,IntAct |
| CDC7 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| MPP1 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| RAD17 | CLSPN | 25348397 | N/A | physical interaction | ComPPI |
| BRCA1 | CLSPN | 14525934 15096610 25348397 | N/A | experimental interaction detection,physical interaction,in vitro,in vivo | ComPPI,HPRD |
| CLSPN | USP28 | 14525934 16901786 25348397 | N/A | experimental interaction detection,physical interaction,in vitro,in vivo | ComPPI,HPRD |
| CLSPN | TIMELESS | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | FBXW11 | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | PMS2 | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | PMS2CL | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | LTA | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | HERC2 | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | HERC2P3 | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | USP29 | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | CEP250 | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | GINS3 | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | GJB2 | 24234451 25348397 26496610 | association | anti tag coimmunoprecipitation,physical interaction | ComPPI,IntAct |
| CLSPN | LTN1 | 25348397 | N/A | physical interaction | ComPPI |
| CLSPN | PRIMPOL | 24126761 24234451 25348397 | association | tandem affinity purification | ComPPI,IntAct |
| CASP3 | CLSPN | 17431426 27898060 | N/A | N/A | OmniPath |
| PLK1 | CLSPN | 15163406 16885021 16885022 27898060 | inhibition,stimulant | N/A | OmniPath |
| CHEK1 | CLSPN | 11090622 12766152 15279790 15371427 16123041 16963448 18451105 23109433 27898060 | stimulant | N/A | OmniPath |
| CLSPN | CHEK1 | 11090622 12766152 15279790 15371427 16123041 16963448 18451105 23109433 27898060 | inhibition,stimulant | N/A | OmniPath |
| USP28 | CLSPN | 16901786 19680264 27898060 | inhibition,stimulant | N/A | OmniPath |
| ATR | CLSPN | 12766152 18077418 18309293 27898060 | inhibition | N/A | OmniPath |
| CLSPN | UBE2B | 18451105 27898060 | stimulant | N/A | OmniPath |
| E2F4 | CLSPN | 17251008 18319725 27898060 | inhibition | N/A | OmniPath |
| USP7 | CLSPN | 19124652 19680264 19706760 27898060 | stimulant | N/A | OmniPath |
| CDC7 | CLSPN | 18084324 23598722 27898060 | N/A | N/A | OmniPath |
| FBXW11 | CLSPN | 16885021 16885022 18662541 22017875 25332235 25515538 27898060 | inhibition | N/A | OmniPath |
| PI4K2A | CLSPN | 18082599 27898060 | inhibition | N/A | OmniPath |
