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GENE：RAB40B

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RAB40B
FullNmae RAB40B, member RAS oncogene family
LocusType gene with protein product
Status Approved
HGNC_id HGNC:18284
EnsembleID ENSG00000141542
Uniprot Q12829

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RAB40B autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
RAB40B GO:0003924,GO:0005515,GO:0005525,GO:0005635,GO:0005768,GO:0005886,GO:0008021,GO:0016567,GO:0035556,GO:0048471,GO:0072659,GO:1901998

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
APP RAB40B 21832049 23180781 physical association protein array InnateDB

Source Target Pmid Interactiontype Methods Database
AR RAB40B 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
YBX1 RAB40B 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
CTCF RAB40B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 RAB40B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 RAB40B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS RAB40B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A RAB40B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 RAB40B 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000029D9F1 RAB40B 21282569 rna interference,inhibition array technology,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay miRSponge
URS000029D9F1 RAB40B 21282569 25416803 25790780 mrna cleavage,inhibition array technology,western blot,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay TarBase
URS00000F31F4 RAB40B 19074876 25416803 mrna cleavage,inhibition array technology TarBase
URS00000B59A2 RAB40B 19074876 25416803 mrna cleavage,inhibition array technology TarBase
URS000003ABC4 RAB40B 19088304 25416803 mrna cleavage,inhibition array technology TarBase
URS0000411752 RAB40B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000EEF5F RAB40B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001FC26E RAB40B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000005CE28 RAB40B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000753AD RAB40B 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000040EE1D RAB40B 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS000041CB9C RAB40B 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS0000171CD1 RAB40B 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS000075B538 RAB40B 25416803 27418678 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
CUL5 RAB40B 25348397 N/A physical interaction ComPPI
FHL3 RAB40B 25348397 N/A physical interaction ComPPI
EFEMP2 RAB40B 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RABGGTB RAB40B 25348397 N/A physical interaction ComPPI
HNRNPL RAB40B 25348397 N/A physical interaction ComPPI
ANKRD27 RAB40B 25348397 N/A physical interaction ComPPI
ELOB RAB40B 25348397 N/A physical interaction ComPPI
ELOC RAB40B 25348397 N/A physical interaction ComPPI
FHIT RAB40B 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
RAB40C RAB40B 25348397 N/A physical interaction ComPPI
APP RAB40B 25348397 N/A physical interaction ComPPI
DCAF17 RAB40B 25348397 N/A physical interaction ComPPI
ISCA1 RAB40B 25348397 N/A physical interaction ComPPI
RAB40B WFDC1 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
RAB40B RAB40AL 25348397 N/A physical interaction ComPPI

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