GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
ARF3 |
FullNmae |
ADP ribosylation factor 3 |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:654 |
EnsembleID |
ENSG00000134287 |
Uniprot |
P61204 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
ARF3 |
autosis |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
ARF3 |
GO:0000139,GO:0003924,GO:0005515,GO:0005525,GO:0005525,GO:0005737,GO:0005886,GO:0006886,GO:0006890,GO:0016192,GO:0048471,GO:0070062 |
KEGG Annotation:
GeneSymbol |
GeneID |
Pathway |
Pathway Name |
ARF3 |
hsa:377 |
path:hsa04144 |
Endocytosis - Homo sapiens (human) |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
AR |
ARF3 |
20610535
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
ETS1 |
ARF3 |
18971253
20019798
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
YBX1 |
ARF3 |
19151767
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
SMARCA4 |
ARF3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CEBPA |
ARF3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CTCF |
ARF3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
EGR1 |
ARF3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
SPI1 |
ARF3 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS00003CF1AD |
ARF3 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS000016D2D4 |
ARF3 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS00005F1B8C |
ARF3 |
23592263
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000022AAA |
ARF3 |
23592263
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00002C7B2B |
ARF3 |
23592263
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00000B0E50 |
ARF3 |
23592263
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000345DEB |
ARF3 |
23592263
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000007F792 |
ARF3 |
21572407
23706177
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000148B91 |
ARF3 |
21572407
23706177
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000085F64 |
ARF3 |
21572407
23706177
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000076B539 |
ARF3 |
21572407
23706177
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00000939AF |
ARF3 |
21572407
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
CDC73 |
ARF3 |
25348397
|
N/A |
physical interaction |
ComPPI |
GGA2 |
ARF3 |
10749927
14525934
25348397
|
N/A |
two hybrid,physical interaction,two hybrid |
ComPPI,HPRD |
PICK1 |
ARF3 |
10623590
14525934
25348397
|
N/A |
two hybrid,two hybrid |
ComPPI,HPRD |
SLC2A4 |
ARF3 |
14525934
16396496
25348397
|
N/A |
experimental interaction detection,physical interaction,in vivo |
ComPPI,HPRD |
ARF3 |
KIF23 |
10506747
14525934
25348397
27898060
|
N/A |
two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid |
ComPPI,HPRD,OmniPath |
ARF3 |
ARFIP2 |
14525934
24234451
25348397
9038142
9312003
|
physical association |
two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid |
ComPPI,HPRD,IntAct |
ARF3 |
ARFIP1 |
10413101
14525934
25348397
27898060
9038142
|
N/A |
two hybrid,experimental interaction detection,physical interaction,in vitro,in vivo,two hybrid |
ComPPI,HPRD,OmniPath |
ARF3 |
GGA1 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
GGA3 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
ELAVL1 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
SIRT7 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
ATN1 |
14525934
16713569
24234451
25348397
|
physical association |
two hybrid,physical interaction,two hybrid |
ComPPI,HPRD,IntAct |
ARF3 |
ARF1 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
ITGA4 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
MMS19 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
CLN3 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
FAF2 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
HNRNPA1 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
FOXA1 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
TRIM25 |
25348397
|
N/A |
physical interaction |
ComPPI |
ARF3 |
MAPK13 |
19135240
24234451
25348397
|
association |
anti tag coimmunoprecipitation |
ComPPI,IntAct |
ARF3 |
TFDP1 |
24234451
25348397
27705803
|
association |
tandem affinity purification |
ComPPI,IntAct |
ARF3 |
LNX1 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
Visualization