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GENE：DEPDC1B

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol DEPDC1B
FullNmae DEP domain containing 1B
LocusType gene with protein product
Status Approved
HGNC_id HGNC:24902
EnsembleID ENSG00000035499
Uniprot Q8WUY9

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
DEPDC1B parthanatos 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
DEPDC1B mitotic_cd 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
DEPDC1B immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
DEPDC1B autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
DEPDC1B GO:0005096,GO:0016477,GO:0030177,GO:0030177,GO:0035556

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ESR1 DEPDC1B 21878914 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
ETS1 DEPDC1B 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA3 DEPDC1B 21878914 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXA1 DEPDC1B 18971253 21878914 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
FOXP3 DEPDC1B 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 DEPDC1B 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00000CF1D2 DEPDC1B 20371350 25416803 mrna cleavage,inhibition nucleotide sequence identification TarBase
URS0000008A99 DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000008F0CF DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000015F70F DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00000AD002 DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000039D790 DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00000D2680 DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00004283FE DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000043D2C1 DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000008AA34 DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS0000118224 DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00002C02E4 DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS000015188E DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase
URS00002CE0C6 DEPDC1B 20371350 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
FAM110A DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CETN2 DEPDC1B 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
CBY1 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RTKN DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
GIGYF1 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
MAGI1 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RAB3IP DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SH3PXD2A DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
MDC1 DEPDC1B 25348397 N/A physical interaction ComPPI
RAB9A DEPDC1B 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
CDK16 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
KIF13B DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CDC25B DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
TGOLN2 DEPDC1B 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
ZNF638 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
SIPA1L1 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
EIF4E2 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
USP21 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
LIMA1 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
KSR1 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
LRFN1 DEPDC1B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
DEPDC1B SRSF12 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct

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