GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
TRIM16 |
FullNmae |
tripartite motif containing 16 |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:17241 |
EnsembleID |
ENSG00000221926 |
Uniprot |
O95361 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
TRIM16 |
immunogenic |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
TRIM16 |
autosis |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
TRIM16 |
GO:0003677,GO:0005515,GO:0005737,GO:0005829,GO:0005886,GO:0008270,GO:0016605,GO:0016740,GO:0019966,GO:0032089,GO:0032526,GO:0032731,GO:0045618,GO:0045893,GO:0046683,GO:0048386,GO:0060416 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
AR |
TRIM16 |
20610535
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
E2F4 |
TRIM16 |
17531812
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
ESR1 |
TRIM16 |
20034404
21878914
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
ETS1 |
TRIM16 |
18971253
20019798
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
GATA3 |
TRIM16 |
21878914
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
FOXA1 |
TRIM16 |
18971253
21878914
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
YBX1 |
TRIM16 |
19151767
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
FOXP3 |
TRIM16 |
20554955
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
FOS |
TRIM16 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
GATA2 |
TRIM16 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS0000237AF9 |
TRIM16 |
18185580
25416803
|
mrna cleavage,inhibition |
array technology |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
LGALS3 |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
CUL5 |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
VIM |
TRIM16 |
20729920
24234451
25348397
|
colocalization,physical association |
anti bait coimmunoprecipitation,physical interaction,confocal microscopy |
ComPPI,IntAct |
OPTN |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
SETDB1 |
TRIM16 |
14525934
16169070
24234451
25348397
|
physical association |
two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid |
ComPPI,HPRD,IntAct |
E2F1 |
TRIM16 |
20729920
24234451
25348397
|
physical association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
CUL4A |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
LGALS2 |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
TFEB |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
BECN1 |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
TERF1 |
TRIM16 |
21044950
24234451
25348397
|
physical association |
physical interaction,bimolecular fluorescence complementation |
ComPPI,IntAct |
POT1 |
TRIM16 |
21044950
24234451
25348397
|
physical association |
physical interaction,bimolecular fluorescence complementation |
ComPPI,IntAct |
TINF2 |
TRIM16 |
21044950
24234451
25348397
|
physical association |
pull down,physical interaction,bimolecular fluorescence complementation |
ComPPI,IntAct |
TOMM34 |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
ULK1 |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
PPP3CB |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
RRAGB |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
RRAGD |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
ACD |
TRIM16 |
21044950
24234451
25348397
|
physical association |
physical interaction,bimolecular fluorescence complementation |
ComPPI,IntAct |
ATG16L1 |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
MCM7 |
TRIM16 |
25348397
|
N/A |
physical interaction |
ComPPI |
TRIM16 |
APP |
25348397
|
N/A |
physical interaction |
ComPPI |
TRIM16 |
MOV10 |
25348397
|
N/A |
physical interaction |
ComPPI |
TRIM16 |
NXF1 |
25348397
|
N/A |
physical interaction |
ComPPI |
TRIM16 |
DEPTOR |
25348397
|
N/A |
physical interaction |
ComPPI |
Visualization