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GENE：TRIM16

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol TRIM16
FullNmae tripartite motif containing 16
LocusType gene with protein product
Status Approved
HGNC_id HGNC:17241
EnsembleID ENSG00000221926
Uniprot O95361

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
TRIM16 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
TRIM16 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
TRIM16 GO:0003677,GO:0005515,GO:0005737,GO:0005829,GO:0005886,GO:0008270,GO:0016605,GO:0016740,GO:0019966,GO:0032089,GO:0032526,GO:0032731,GO:0045618,GO:0045893,GO:0046683,GO:0048386,GO:0060416

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR TRIM16 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
E2F4 TRIM16 17531812 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ESR1 TRIM16 20034404 21878914 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
ETS1 TRIM16 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA3 TRIM16 21878914 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXA1 TRIM16 18971253 21878914 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 TRIM16 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 TRIM16 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
FOS TRIM16 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 TRIM16 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000237AF9 TRIM16 18185580 25416803 mrna cleavage,inhibition array technology TarBase

Source Target Pmid Interactiontype Methods Database
LGALS3 TRIM16 25348397 N/A physical interaction ComPPI
CUL5 TRIM16 25348397 N/A physical interaction ComPPI
VIM TRIM16 20729920 24234451 25348397 colocalization,physical association anti bait coimmunoprecipitation,physical interaction,confocal microscopy ComPPI,IntAct
OPTN TRIM16 25348397 N/A physical interaction ComPPI
SETDB1 TRIM16 14525934 16169070 24234451 25348397 physical association two hybrid,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
E2F1 TRIM16 20729920 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CUL4A TRIM16 25348397 N/A physical interaction ComPPI
LGALS2 TRIM16 25348397 N/A physical interaction ComPPI
TFEB TRIM16 25348397 N/A physical interaction ComPPI
BECN1 TRIM16 25348397 N/A physical interaction ComPPI
TERF1 TRIM16 21044950 24234451 25348397 physical association physical interaction,bimolecular fluorescence complementation ComPPI,IntAct
POT1 TRIM16 21044950 24234451 25348397 physical association physical interaction,bimolecular fluorescence complementation ComPPI,IntAct
TINF2 TRIM16 21044950 24234451 25348397 physical association pull down,physical interaction,bimolecular fluorescence complementation ComPPI,IntAct
TOMM34 TRIM16 25348397 N/A physical interaction ComPPI
ULK1 TRIM16 25348397 N/A physical interaction ComPPI
PPP3CB TRIM16 25348397 N/A physical interaction ComPPI
RRAGB TRIM16 25348397 N/A physical interaction ComPPI
RRAGD TRIM16 25348397 N/A physical interaction ComPPI
ACD TRIM16 21044950 24234451 25348397 physical association physical interaction,bimolecular fluorescence complementation ComPPI,IntAct
ATG16L1 TRIM16 25348397 N/A physical interaction ComPPI
MCM7 TRIM16 25348397 N/A physical interaction ComPPI
TRIM16 APP 25348397 N/A physical interaction ComPPI
TRIM16 MOV10 25348397 N/A physical interaction ComPPI
TRIM16 NXF1 25348397 N/A physical interaction ComPPI
TRIM16 DEPTOR 25348397 N/A physical interaction ComPPI

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