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GENE：GALNT6

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol GALNT6
FullNmae polypeptide N-acetylgalactosaminyltransferase 6
LocusType gene with protein product
Status Approved
HGNC_id HGNC:4128
EnsembleID ENSG00000139629
Uniprot Q8NCL4

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
GALNT6 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
GALNT6 GO:0000139,GO:0004653,GO:0004653,GO:0004653,GO:0005515,GO:0005794,GO:0005794,GO:0006493,GO:0016266,GO:0018243,GO:0030246,GO:0046872,GO:0048471

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
GALNT6 hsa:11226 path:hsa00512 Mucin type O-glycan biosynthesis - Homo sapiens (human)
GALNT6 hsa:11226 path:hsa00514 Other types of O-glycan biosynthesis - Homo sapiens (human)
GALNT6 hsa:11226 path:hsa01100 Metabolic pathways - Homo sapiens (human)

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR GALNT6 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
E2F4 GALNT6 17531812 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 GALNT6 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA1 GALNT6 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 GALNT6 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
TFAP2C GALNT6 20629094 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
SMARCA4 GALNT6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF GALNT6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 GALNT6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 GALNT6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A GALNT6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 GALNT6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TRIM28 GALNT6 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 GALNT6 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00004A6E26 GALNT6 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000166778 GALNT6 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000451A1 GALNT6 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000122F23 GALNT6 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000008A99 GALNT6 23824327 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00000EE7F0 GALNT6 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000030F801 GALNT6 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075B538 GALNT6 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000366551 GALNT6 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003380CC GALNT6 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00001481F9 GALNT6 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000221168 GALNT6 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00005CC20C GALNT6 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00000E7139 GALNT6 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS0000453664 GALNT6 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000075C4B1 GALNT6 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS000075BDAA GALNT6 25416803 27292025 mrna cleavage,inhibition clip TarBase
URS00000EC1BE GALNT6 25416803 27292025 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
SLC9A1 GALNT6 25348397 N/A physical interaction ComPPI
ATP2B2 GALNT6 25348397 N/A physical interaction ComPPI
GAS6 GALNT6 25348397 N/A physical interaction ComPPI
EDEM1 GALNT6 25348397 N/A physical interaction ComPPI
GALNT6 ALDOA 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
GALNT6 SLC5A6 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
GALNT6 ATP2B3 25348397 N/A physical interaction ComPPI
GALNT6 ASPHD2 25348397 N/A physical interaction ComPPI
GALNT6 NDUFB6 25348397 N/A physical interaction ComPPI
GALNT6 NDUFB8 25348397 N/A physical interaction ComPPI
GALNT6 NDUFA12 25348397 N/A physical interaction ComPPI
GALNT6 NDUFS6 25348397 N/A physical interaction ComPPI
GALNT6 NDUFB5 25348397 N/A physical interaction ComPPI
GALNT6 NDUFS4 25348397 N/A physical interaction ComPPI
GALNT6 SLC39A10 25348397 N/A physical interaction ComPPI
GALNT6 FN1 10464263 14525934 27898060 N/A experimental interaction detection HPRD,OmniPath
RPL13 GALNT6 24234451 30021884 physical association cross-linking study IntAct

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