Gene Information gene info

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GENE：TSPAN1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol TSPAN1
FullNmae tetraspanin 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:20657
EnsembleID ENSG00000117472
Uniprot O60635

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
TSPAN1 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
TSPAN1 GO:0005515,GO:0005654,GO:0005737,GO:0005765,GO:0005886,GO:0016020,GO:0030054,GO:0031982,GO:0031982,GO:0043231,GO:0048471,GO:0050821,GO:0070062

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
GATA1 TSPAN1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 TSPAN1 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
YBX1 TSPAN1 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
TFAP2C TSPAN1 20629094 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
PRDM14 TSPAN1 18971253 20953172 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
CTCF TSPAN1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 TSPAN1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 TSPAN1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A TSPAN1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TP53 TSPAN1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000058BB84 TSPAN1 25416803 26054975 mrna cleavage,inhibition experimental interaction detection,western blot,quantitative reverse transcription pcr,immunohistochemistry,miRNA interference luciferase reporter assay TarBase
URS0000001EB3 TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000010BD8D TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00000C48FA TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00003758F0 TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00007455B8 TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00003E2232 TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS0000458AD2 TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000031B6ED TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000057FDB8 TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS00003808EC TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000034B6F5 TSPAN1 23592263 25416803 mrna cleavage,inhibition clip TarBase
URS000076B539 TSPAN1 21572407 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000085F64 TSPAN1 21572407 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000EED18 TSPAN1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000011DF TSPAN1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000224AEA TSPAN1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000003575B TSPAN1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000427B68 TSPAN1 21572407 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004719AB TSPAN1 21572407 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002C02E4 TSPAN1 21572407 25416803 mrna cleavage,inhibition clip TarBase
URS000006BE7D TSPAN1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000024B619 TSPAN1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00001F9A0F TSPAN1 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000049FAE8 TSPAN1 19536157 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
TSPAN1 MDK 25361965 interaction type N/A PTMCode2
MDK TSPAN1 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
MDK TSPAN1 14525934 18851943 25348397 27898060 N/A two hybrid,experimental interaction detection,in vitro,in vivo,two hybrid ComPPI,HPRD,OmniPath
NFKBIB TSPAN1 21988832 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
TFAM TSPAN1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TSPAN1 TMEM80 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct

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