Gene Information gene info

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GENE：SBNO1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol SBNO1
FullNmae strawberry notch homolog 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:22973
EnsembleID ENSG00000139697
Uniprot A3KN83

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
SBNO1 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
SBNO1 GO:0003674,GO:0005575,GO:0005634,GO:0006355,GO:0008150,GO:0031490,GO:0042393

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 SBNO1 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 SBNO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA SBNO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF SBNO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 SBNO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A SBNO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF SBNO1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000083D87 SBNO1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00002FF522 SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003003B4 SBNO1 20371350 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000013D17D SBNO1 20371350 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000006FDD4 SBNO1 20371350 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000149319 SBNO1 20371350 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002C83DA SBNO1 20371350 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000412AC7 SBNO1 20371350 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000759EB8 SBNO1 20371350 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00007455B8 SBNO1 20371350 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00001EFEC1 SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000475586 SBNO1 20371350 21572407 23446348 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000F6E49 SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00002FC5B0 SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00000D2680 SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00004283FE SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000041CB9C SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000007D64A SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00000F0F49 SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000040EE1D SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000171CD1 SBNO1 20371350 21572407 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000170CF4 SBNO1 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000075AB14 SBNO1 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000346991 SBNO1 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000027080C SBNO1 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000041E949 SBNO1 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000508C13 SBNO1 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000070CD2 SBNO1 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00005E6F45 SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000AD002 SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000EC1BE SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00001481F9 SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075BDAA SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000008A99 SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075BC91 SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000221168 SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003380CC SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00005CC20C SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075C4B1 SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000018E6CD SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00005CCD18 SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000486E0B SBNO1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000007340 SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002075FA SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000009A9A2 SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000519450 SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000017CCCB SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00000BF7F9 SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000015A0D9 SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000047A8F SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000585553 SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000214763 SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00005DEC41 SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075B0F8 SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075D15B SBNO1 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
MCM6 SBNO1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
MCM2 SBNO1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
NTRK1 SBNO1 25348397 N/A physical interaction ComPPI
SUB1 SBNO1 25348397 N/A physical interaction ComPPI
PRMT5 SBNO1 25348397 N/A physical interaction ComPPI
SRSF2 SBNO1 25348397 N/A physical interaction ComPPI
SPAG9 SBNO1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RTN4 SBNO1 25348397 N/A physical interaction ComPPI
CDK8 SBNO1 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
SSRP1 SBNO1 25348397 N/A physical interaction ComPPI
MCM4 SBNO1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
GTF3C4 SBNO1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IVNS1ABP SBNO1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
NTAQ1 SBNO1 25348397 N/A physical interaction ComPPI
UBR4 SBNO1 25348397 N/A physical interaction ComPPI
RBM25 SBNO1 25348397 N/A physical interaction ComPPI
USP15 SBNO1 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
H2BC9 SBNO1 24234451 30021884 physical association cross-linking study IntAct

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