GENE：RAB38
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | RAB38 |
| FullNmae | RAB38, member RAS oncogene family |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:9776 |
| EnsembleID | ENSG00000123892 |
| Uniprot | P57729 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| RAB38 | immunogenic | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
| RAB38 | autosis | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| RAB38 | GO:0003924,GO:0003924,GO:0005515,GO:0005525,GO:0005739,GO:0005739,GO:0005764,GO:0005769,GO:0005802,GO:0005829,GO:0005886,GO:0006886,GO:0007005,GO:0007264,GO:0012505,GO:0015031,GO:0016020,GO:0016192,GO:0030670,GO:0030742,GO:0032438,GO:0033162,GO:0033162,GO:0035646,GO:0035650,GO:0035651,GO:0036461,GO:0042470,GO:0042470,GO:0044233,GO:0044297,GO:0045335,GO:0048023,GO:0048471,GO:0060155,GO:0072657,GO:0090383,GO:1903232,GO:1903232,GO:1904377,GO:2001247 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| SMARCA4 | RAB38 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| CTCF | RAB38 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| EGR1 | RAB38 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | RAB38 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| GATA2 | RAB38 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | RAB38 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| URS0000324096 | RAB38 | 18668040 25416803 | mrna cleavage,inhibition | experimental interaction detection | TarBase |
| URS0000065D58 | RAB38 | 25416803 25810374 | mrna cleavage,inhibition | array technology,quantitative reverse transcription pcr,miRNA interference luciferase reporter assay | TarBase |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| SMAD4 | RAB38 | 14525934 15761153 25348397 | N/A | experimental interaction detection,in vivo | ComPPI,HPRD |
| SMAD1 | RAB38 | 14525934 15761153 25348397 | N/A | experimental interaction detection,in vivo | ComPPI,HPRD |
| SMAD2 | RAB38 | 14525934 15761153 25348397 | N/A | experimental interaction detection,in vivo | ComPPI,HPRD |
| SMAD3 | RAB38 | 14525934 15761153 25348397 | N/A | experimental interaction detection,in vivo | ComPPI,HPRD |
| BMPR1B | RAB38 | 14525934 15761153 25348397 | N/A | experimental interaction detection,in vivo | ComPPI,HPRD |
| RAB38 | APP | 25348397 | N/A | physical interaction | ComPPI |
| RAB38 | TGFBR1 | 14525934 15761153 | N/A | experimental interaction detection | HPRD |