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GENE：TMF1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol TMF1
FullNmae TATA element modulatory factor 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:11870
EnsembleID ENSG00000144747
Uniprot P82094

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
TMF1 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
TMF1 GO:0000139,GO:0001675,GO:0001819,GO:0003677,GO:0005515,GO:0005634,GO:0005783,GO:0005794,GO:0005794,GO:0005829,GO:0007289,GO:0010629,GO:0030317,GO:0030374,GO:0030521,GO:0032275,GO:0033327,GO:0042742,GO:0045944,GO:0050681,GO:0061136,GO:1904019,GO:1904036,GO:2000845

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 TMF1 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
FOXP3 TMF1 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 TMF1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF TMF1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 TMF1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MYC TMF1 N/A trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00002FC5B0 TMF1 20371350 21572407 22012620 22473208 23446348 25416803 mrna cleavage,inhibition nucleotide sequence identification,clip TarBase
URS00005651EE TMF1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000F0F49 TMF1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00001597DC TMF1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS0000085F64 TMF1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000030F801 TMF1 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS00000B989F TMF1 20371350 21572407 22012620 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00001A7F58 TMF1 20371350 21572407 22012620 22473208 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00000C85B2 TMF1 20371350 21572407 22012620 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000045DBD TMF1 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000040828B TMF1 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00005C1F22 TMF1 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000042935A TMF1 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00000F4AC3 TMF1 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00000C5BAA TMF1 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00000AA464 TMF1 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS00003E226A TMF1 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS0000236310 TMF1 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS000018C928 TMF1 22473208 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
SMARCA4 TMF1 25361965 interaction type N/A PTMCode2
TMF1 SMARCA4 25361965 interaction type N/A PTMCode2
FER TMF1 25361965 interaction type N/A PTMCode2
TMF1 FER 25361965 interaction type N/A PTMCode2
AR TMF1 25361965 interaction type N/A PTMCode2
TMF1 AR 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
AR TMF1 12165860 14525934 25348397 N/A affinity chromatography technology,two hybrid,experimental interaction detection,physical interaction,biochemical,in vitro,in vivo ComPPI,HPRD
USP7 TMF1 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
KAT2B TMF1 25348397 N/A physical interaction ComPPI
AP1M2 TMF1 25348397 N/A physical interaction ComPPI
SMARCA4 TMF1 12044884 25348397 27898060 N/A two hybrid,in vitro ComPPI,OmniPath
PLK1 TMF1 19596235 24234451 25348397 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
FER TMF1 14525934 25348397 9742951 N/A two hybrid,experimental interaction detection,physical interaction,in vitro,in vivo,two hybrid ComPPI,HPRD
TMF1 RAB6A 14525934 15128430 25348397 27898060 N/A experimental interaction detection,in vitro ComPPI,HPRD,OmniPath
TMF1 GFI1B 14525934 16713569 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
TMF1 ITSN2 25348397 N/A physical interaction ComPPI
TMF1 NR3C1 20195357 24234451 25348397 physical association display technology,physical interaction,tandem affinity purification ComPPI,IntAct
TMF1 CCDC183 25348397 N/A physical interaction ComPPI
TMF1 TMEM216 24234451 25348397 26638075 association physical interaction,proximity-dependent biotin identification ComPPI,IntAct
TMF1 FOXK2 24234451 25348397 25609649 association physical interaction,tandem affinity purification ComPPI,IntAct
TMF1 PPM1H 25348397 N/A physical interaction ComPPI
TMF1 BSPRY 25348397 N/A physical interaction ComPPI
TMF1 PDHA1 24234451 25348397 29128334 association cross-linking study,physical interaction ComPPI,IntAct
TMF1 CD247 24234451 24502978 25348397 association pull down ComPPI,IntAct
TMF1 TFAP2C 24234451 24835590 25348397 physical association two hybrid ComPPI,IntAct
TMF1 ESR2 24234451 25348397 25604459 association tandem affinity purification ComPPI,IntAct
TMF1 BET1 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
TMF1 TGOLN2 24234451 25348397 29568061 association proximity-dependent biotin identification ComPPI,IntAct
CEBPZ TMF1 24234451 30021884 physical association cross-linking study IntAct

Visualization










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