Gene Information gene info

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GENE：PHF1

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol PHF1
FullNmae PHD finger protein 1
LocusType gene with protein product
Status Approved
HGNC_id HGNC:8919
EnsembleID ENSG00000112511
Uniprot O43189

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
PHF1 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
PHF1 GO:0001222,GO:0003677,GO:0003682,GO:0005515,GO:0005634,GO:0005634,GO:0005654,GO:0005654,GO:0005813,GO:0005829,GO:0006325,GO:0006355,GO:0035064,GO:0035064,GO:0035861,GO:0042802,GO:0046872,GO:0140861,GO:1990226

KEGG Annotation:

GeneSymbol GeneID Pathway Pathway Name
PHF1 hsa:5252 path:hsa03083 Polycomb repressive complex - Homo sapiens (human)

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
EZH2 PHF1 23180781 24457600 physical association anti tag coimmunoprecipitation InnateDB
SUZ12 PHF1 23180781 24457600 physical association anti tag coimmunoprecipitation InnateDB
TRIM23 PHF1 23180781 25416956 physical association two hybrid InnateDB

Source Target Pmid Interactiontype Methods Database
ETS1 PHF1 20019798 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
GATA2 PHF1 19941826 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
YBX1 PHF1 19151767 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 PHF1 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
CTCF PHF1 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 PHF1 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS00002CEB74 PHF1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000224AEA PHF1 23824327 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00001CE046 PHF1 23824327 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000214763 PHF1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000204177 PHF1 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000060B2B PHF1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000353492 PHF1 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002E177F PHF1 25416803 26701625 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
H3-3A PHF1 25361965 interaction type N/A PTMCode2
PHF1 H3-3A 25361965 interaction type N/A PTMCode2

Source Target Pmid Interactiontype Methods Database
RBPMS PHF1 14525934 16189514 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,validated two hybrid,two hybrid ComPPI,HPRD,IntAct
ARID5A PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
GPKOW PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
BHLHE40 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SORBS3 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
LZTS2 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
ARRDC3 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
AVPI1 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PRR20D PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
KRT40 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
MDFI PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
HSD17B14 PHF1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
EZH2 PHF1 11571280 14525934 18285464 18385154 23142980 23273982 24234451 24457600 25348397 26496610 27705803 27898060 association,physical association anti tag coimmunoprecipitation,two hybrid,physical interaction,tandem affinity purification,two hybrid ComPPI,HPRD,IntAct,OmniPath
NCR1 PHF1 25348397 N/A physical interaction ComPPI
DHX9 PHF1 25348397 N/A physical interaction ComPPI
FHL2 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
DEK PHF1 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
TNS2 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
XRCC5 PHF1 25348397 N/A physical interaction ComPPI
XRCC6 PHF1 25348397 N/A physical interaction ComPPI
PDLIM7 PHF1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
RBBP4 PHF1 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
ZBTB16 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
TRIM23 PHF1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
CUL4B PHF1 23238014 24234451 25348397 association anti bait coimmunoprecipitation ComPPI,IntAct
SMC1A PHF1 25348397 N/A physical interaction ComPPI
H3-4 PHF1 25348397 N/A physical interaction ComPPI
TFCP2 PHF1 21516116 24234451 25348397 25416956 physical association two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
PFDN5 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
EED PHF1 24234451 25348397 26496610 27705803 association anti tag coimmunoprecipitation,physical interaction,tandem affinity purification ComPPI,IntAct
MAGED1 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
H3C1 PHF1 25348397 N/A physical interaction ComPPI
IRAK1BP1 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
EXOSC4 PHF1 25348397 N/A physical interaction ComPPI
TFIP11 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
BIRC7 PHF1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
ELAVL1 PHF1 25348397 N/A physical interaction ComPPI
DDB1 PHF1 23238014 24234451 25348397 association anti bait coimmunoprecipitation ComPPI,IntAct
RAD50 PHF1 25348397 N/A physical interaction ComPPI
DYSF PHF1 23414517 24234451 25348397 physical association two hybrid fragment pooling approach ComPPI,IntAct
EZH1 PHF1 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
ZRANB1 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
NEK6 PHF1 25348397 N/A physical interaction ComPPI
CALCOCO2 PHF1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
INCA1 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
POLR2G PHF1 25348397 N/A physical interaction ComPPI
SUZ12 PHF1 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
THAP1 PHF1 14525934 16189514 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid prey pooling approach,two hybrid ComPPI,HPRD,IntAct
ATXN7L1 PHF1 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
LCOR PHF1 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
KIAA0408 PHF1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 TP53 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
PHF1 RBBP7 24234451 25348397 27705803 association physical interaction,tandem affinity purification ComPPI,IntAct
PHF1 HIC1 25348397 N/A physical interaction ComPPI
PHF1 NAB2 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
PHF1 VAC14 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
PHF1 HDAC1 25348397 N/A physical interaction ComPPI
PHF1 PROSER2 25348397 N/A physical interaction ComPPI
PHF1 EPOP 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
PHF1 FBL 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
PHF1 CCT8 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
PHF1 PHF19 24234451 25348397 27705803 association tandem affinity purification ComPPI,IntAct
PHF1 SMG9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 ZNF526 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 ZNF71 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 ZNF688 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 MORN3 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 RBBP8NL 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 ZIM2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 DMBX1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 FOSB 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 EFHC2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 GOLGA6L9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 BHLHB9 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 LBX1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PHF1 SUZ12 18285464 18385154 23273982 24457600 27898060 stimulant N/A OmniPath

Source Target Pmid Interactiontype Methods Database
URS00009AE834 PHF1 27087310 direct interaction,inhibition N/A NPInter

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