Gene Information gene info

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GENE：RNF38

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RNF38
FullNmae ring finger protein 38
LocusType gene with protein product
Status Approved
HGNC_id HGNC:18052
EnsembleID ENSG00000137075
Uniprot Q9H0F5

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RNF38 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
RNF38 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
RNF38 GO:0005515,GO:0005634,GO:0005654,GO:0008584,GO:0016567,GO:0016567,GO:0016567,GO:0036126,GO:0046872,GO:0061630,GO:0061630

Protein-Protein Interaction(String):

Gene-Drug Network:

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
ETS1 RNF38 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
FOXP3 RNF38 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink
PRDM14 RNF38 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS0000237AF9 RNF38 18185580 25416803 mrna cleavage,inhibition array technology TarBase
URS000003ABC4 RNF38 19088304 25416803 mrna cleavage,inhibition array technology TarBase
URS0000277201 RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000171CD1 RNF38 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS000041CB9C RNF38 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS000040EE1D RNF38 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS0000045DBD RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00001E0AEA RNF38 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS000061E50F RNF38 20371350 23592263 24398324 25416803 mrna cleavage,inhibition clip TarBase
URS00003E6EFA RNF38 20371350 23592263 24398324 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002EF20A RNF38 20371350 23592263 24398324 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000209F04 RNF38 20371350 23592263 24398324 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00004F2EB0 RNF38 20371350 23592263 24398324 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS00002E177F RNF38 20371350 23592263 24398324 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS0000081E1F RNF38 20371350 23592263 24398324 25416803 26701625 mrna cleavage,inhibition clip TarBase
URS000075BEA7 RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00005D986D RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000508C13 RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00001BCAC5 RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000065FDF RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000315338 RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000183BED RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00002DD349 RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS00001CC864 RNF38 23313552 25416803 mrna cleavage,inhibition clip TarBase
URS0000330617 RNF38 22473208 25416803 mrna cleavage,inhibition clip TarBase
URS00001B341F RNF38 22473208 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
KRTAP10-8 RNF38 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
UBE2D1 RNF38 19549727 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
UBE2D4 RNF38 19549727 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
UBE2D2 RNF38 19549727 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
UBC RNF38 25348397 N/A physical interaction ComPPI
TP73 RNF38 25348397 N/A physical interaction ComPPI
LDB1 RNF38 25348397 N/A physical interaction ComPPI
ZDHHC17 RNF38 24234451 24705354 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
TP63 RNF38 25348397 N/A physical interaction ComPPI
UBE2D3 RNF38 19549727 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
TRIM25 RNF38 25348397 N/A physical interaction ComPPI
ELAVL1 RNF38 25348397 N/A physical interaction ComPPI
UBE2H RNF38 19549727 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
DZIP3 RNF38 22493164 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
RNF114 RNF38 22493164 24234451 25348397 physical association two hybrid,physical interaction,two hybrid array ComPPI,IntAct
TP53 RNF38 25348397 N/A physical interaction ComPPI

Source Target Pmid Interactiontype Methods Database
URS00008B3FCD RNF38 27087310 direct interaction,inhibition N/A NPInter

Visualization










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