Gene Information gene info

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GENE：CCDC93

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol CCDC93
FullNmae coiled-coil domain containing 93
LocusType gene with protein product
Status Approved
HGNC_id HGNC:25611
EnsembleID ENSG00000125633
Uniprot Q567U6

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
CCDC93 immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
CCDC93 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
CCDC93 GO:0005515,GO:0005769,GO:0006893,GO:0006893,GO:0015031,GO:0032456,GO:0043231

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR CCDC93 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 CCDC93 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
GATA2 CCDC93 18971253 19941826 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 CCDC93 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA CCDC93 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF CCDC93 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 CCDC93 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 CCDC93 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 CCDC93 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A CCDC93 18971253 trascriptional regulation,stimulation inferred by curator TFlink
MITF CCDC93 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 CCDC93 N/A trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000040828B CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000040780F CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000000EF0B CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003E226A CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00003AA845 CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000044FD7 CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000029D9F1 CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000E7139 CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000096022 CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002C0FCB CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000057A7C CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000047944F CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000004BACE CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00002F0130 CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000521626 CCDC93 23824327 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
HNRNPC CCDC93 25348397 N/A anti tag coimmunoprecipitation,physical interaction ComPPI
OIP5 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
TFPT CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
PSMC3 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CCDC22 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
KRT31 CCDC93 25348397 N/A physical interaction ComPPI
KRT40 CCDC93 25348397 N/A physical interaction ComPPI
CPSF7 CCDC93 25348397 N/A anti tag coimmunoprecipitation,physical interaction ComPPI
EZH2 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
JUN CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
NTRK1 CCDC93 25348397 N/A physical interaction ComPPI
HMG20A CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
RABGEF1 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
COMMD1 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
GIT2 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
GRIPAP1 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
FXR1 CCDC93 25348397 N/A physical interaction ComPPI
PDK1 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
TUFT1 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
ARNTL CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CAVIN1 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
LTBR CCDC93 25348397 N/A physical interaction ComPPI
KDM1A CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
PHF21A CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
YEATS4 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
KIF2B CCDC93 25348397 N/A physical interaction ComPPI
CLOCK CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
TRAF3IP1 CCDC93 17043677 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
PKN3 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
GOLGB1 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
MAX CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
VPS29 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
DZIP3 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
DHX36 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
NUF2 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
COMMD6 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
THAP11 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CCHCR1 CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
LTN1 CCDC93 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
NCKAP5L CCDC93 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CCDC93 HAUS6 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
H2BC9 CCDC93 24234451 30021884 physical association cross-linking study IntAct

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