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GENE：FOCAD

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol FOCAD
FullNmae focadhesin
LocusType gene with protein product
Status Approved
HGNC_id HGNC:23377
EnsembleID ENSG00000188352
Uniprot Q5VW36

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
FOCAD autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
FOCAD GO:0005515,GO:0005829,GO:0005925,GO:0060147

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR FOCAD 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 FOCAD 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
NR1I2 FOCAD 19129222 trascriptional regulation,stimulation chromatin immunoprecipitation assay TFlink
FOXP3 FOCAD 20554955 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
SMARCA4 FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CEBPA FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F1 FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXA1 FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOXP1 FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
GATA2 FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
HNF4A FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
SPI1 FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink
TAL1 FOCAD 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000021D7C8 FOCAD 23622248 25416803 mrna cleavage,inhibition clash TarBase
URS000039607D FOCAD 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000006372A FOCAD 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS00004719AB FOCAD 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000016FD1B FOCAD 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS000008931A FOCAD 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000166778 FOCAD 23446348 25416803 mrna cleavage,inhibition clip TarBase
URS0000427B68 FOCAD 23446348 25416803 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
RAD21 FOCAD 25348397 N/A physical interaction ComPPI
RPL10 FOCAD 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
NTRK1 FOCAD 25348397 N/A physical interaction ComPPI
HNRNPU FOCAD 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
VCL FOCAD 25348397 N/A physical interaction ComPPI
UBE2D3 FOCAD 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
ELP1 FOCAD 25348397 N/A physical interaction ComPPI
SLAIN2 FOCAD 24234451 25348397 26496610 association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct

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