GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
RETREG2 |
FullNmae |
reticulophagy regulator family member 2 |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:28450 |
EnsembleID |
ENSG00000144567 |
Uniprot |
Q8NC44 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
RETREG2 |
autosis |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
RETREG2 |
GO:0005515,GO:0005789,GO:0007029,GO:0030574,GO:0061709,GO:0140506 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
FOXP3 |
RETREG2 |
20554955
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation array |
TFlink |
SMARCA4 |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CEBPA |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CTCF |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
E2F4 |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
ETS1 |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
FOXA1 |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
FOS |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
HNF4A |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
MITF |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
RUNX1 |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
TRIM28 |
RETREG2 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS000021D7C8 |
RETREG2 |
20371350
25416803
|
mrna cleavage,inhibition |
nucleotide sequence identification |
TarBase |
URS000075C1E1 |
RETREG2 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00002A8BC6 |
RETREG2 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000032AE90 |
RETREG2 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00003E5ECC |
RETREG2 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000568FF8 |
RETREG2 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000137EDE |
RETREG2 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000019907A |
RETREG2 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001C770D |
RETREG2 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000041CB9C |
RETREG2 |
23313552
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00004F2EB0 |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000044FD7 |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000013ABA3 |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00000C4DB5 |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001B341F |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000330617 |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001799A3 |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00000B989F |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00002578DA |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000075D860 |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000041FA2C |
RETREG2 |
25416803
26701625
|
mrna cleavage,inhibition |
clip |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
ATP5PO |
RETREG2 |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
YIPF3 |
RETREG2 |
25348397
|
N/A |
physical interaction |
ComPPI |
MAP1LC3B |
RETREG2 |
21900206
24234451
25348397
26040720
|
physical association |
two hybrid,pull down,physical interaction |
ComPPI,IntAct |
ABCD3 |
RETREG2 |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
PVR |
RETREG2 |
25348397
|
N/A |
physical interaction |
ComPPI |
GABARAP |
RETREG2 |
24234451
25348397
26040720
|
physical association |
pull down,physical interaction |
ComPPI,IntAct |
EIF5A |
RETREG2 |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
MAP1LC3A |
RETREG2 |
25348397
|
N/A |
pull down,physical interaction |
ComPPI |
HTR2C |
RETREG2 |
25348397
|
N/A |
physical interaction |
ComPPI |
TRIM25 |
RETREG2 |
25348397
|
N/A |
physical interaction |
ComPPI |
GOLGA3 |
RETREG2 |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
ATP5F1A |
RETREG2 |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
GABARAPL1 |
RETREG2 |
24234451
25348397
26040720
|
physical association |
pull down,physical interaction |
ComPPI,IntAct |
RETREG2 |
CHD3 |
14525934
16169070
24234451
25348397
|
physical association |
physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid |
ComPPI,HPRD,IntAct |
RETREG2 |
ATP5PB |
25348397
|
N/A |
physical interaction |
ComPPI |
RETREG2 |
PRDX2 |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
RETREG2 |
ATP5PD |
24234451
25348397
26496610
|
association |
anti tag coimmunoprecipitation,physical interaction |
ComPPI,IntAct |
Visualization