GeneInfo:
GeneAttribute |
GeneDescription |
GeneSymbol |
BSDC1 |
FullNmae |
BSD domain containing 1 |
LocusType |
gene with protein product |
Status |
Approved |
HGNC_id |
HGNC:25501 |
EnsembleID |
ENSG00000160058 |
Uniprot |
Q9NW68 |
Protein Structure:
Gene Description in Publicaton:
GeneSymbol |
CellDeathType |
PMID |
Description |
GeneType |
BSDC1 |
autosis |
38538696 |
The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) |
retulator signature |
Go Annotation:
GeneSymbol |
Go id |
BSDC1 |
GO:0005515,GO:0005737 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
ETS1 |
BSDC1 |
18971253
20019798
|
trascriptional regulation,stimulation |
inferred by curator,chromatin immunoprecipitation assay |
TFlink |
GATA1 |
BSDC1 |
19941826
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
GATA2 |
BSDC1 |
19941826
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
YBX1 |
BSDC1 |
19151767
|
trascriptional regulation,stimulation |
chromatin immunoprecipitation assay |
TFlink |
SMARCA4 |
BSDC1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
CTCF |
BSDC1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
EGR1 |
BSDC1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
FOXA1 |
BSDC1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
FOS |
BSDC1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
HNF4A |
BSDC1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
ZNF263 |
BSDC1 |
18971253
|
trascriptional regulation,stimulation |
inferred by curator |
TFlink |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
URS00000CBE63 |
BSDC1 |
20371350
25416803
|
mrna cleavage,inhibition |
nucleotide sequence identification |
TarBase |
URS00003D5391 |
BSDC1 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS000000B1C9 |
BSDC1 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS0000031E12 |
BSDC1 |
23622248
25416803
|
mrna cleavage,inhibition |
clash |
TarBase |
URS0000237AF9 |
BSDC1 |
23824327
25416803
27418678
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000040EC3B |
BSDC1 |
23824327
25416803
27418678
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000045DBD |
BSDC1 |
23824327
25416803
27418678
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00002B0B46 |
BSDC1 |
23824327
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00002DD349 |
BSDC1 |
19536157
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000183BED |
BSDC1 |
19536157
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS00001CC864 |
BSDC1 |
19536157
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS0000315338 |
BSDC1 |
19536157
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
URS000017CCCB |
BSDC1 |
19536157
25416803
|
mrna cleavage,inhibition |
clip |
TarBase |
Source |
Target |
Pmid |
Interactiontype |
Methods |
Database |
GABARAPL2 |
BSDC1 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
PHC2 |
BSDC1 |
14525934
16169070
24234451
25348397
|
physical association |
two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid |
ComPPI,HPRD,IntAct |
SERPINB13 |
BSDC1 |
25348397
|
N/A |
physical interaction |
ComPPI |
KLC1 |
BSDC1 |
25348397
|
N/A |
physical interaction |
ComPPI |
GABARAPL1 |
BSDC1 |
24234451
25348397
|
physical association |
two hybrid,two hybrid array,two hybrid prey pooling approach |
ComPPI,IntAct |
Visualization