Gene Information gene info

  1. Home

GENE：CCDC28B

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol CCDC28B
FullNmae coiled-coil domain containing 28B
LocusType gene with protein product
Status Approved
HGNC_id HGNC:28163
EnsembleID ENSG00000160050
Uniprot Q9BUN5

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
CCDC28B immunogenic 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
CCDC28B ferroptosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
CCDC28B autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature
CCDC28B cuproptosis 36010978 Derived from the genome-wide CRISPR-Cas9 loss-of-function test reported in previous literature, 347 potential cuproptosis-related genes (FDR < 0.05) were identified, and for a detailed list of genes, see聽Supplementary Table S1. Cuproptosis-related genes

Go Annotation:

GeneSymbol Go id
CCDC28B GO:0005515,GO:0005737,GO:0005813,GO:0005813,GO:0060271

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
EGR1 CCDC28B 19032775 23180781 physical association anti tag coimmunoprecipitation InnateDB

Source Target Pmid Interactiontype Methods Database
ETS1 CCDC28B 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
PRDM14 CCDC28B 18971253 20953172 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 CCDC28B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF CCDC28B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
E2F4 CCDC28B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
EGR1 CCDC28B 18971253 trascriptional regulation,stimulation inferred by curator TFlink
ZNF263 CCDC28B 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
LAGE3 CCDC28B 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
BBS2 CCDC28B 16327777 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
OSGEP CCDC28B 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
BBS4 CCDC28B 16327777 24234451 25348397 physical association anti tag coimmunoprecipitation,two hybrid,physical interaction ComPPI,IntAct
TTC8 CCDC28B 16327777 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
PRAME CCDC28B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
MKKS CCDC28B 16327777 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
APP CCDC28B 25348397 N/A physical interaction ComPPI
ATRIP CCDC28B 24234451 25348397 25416956 physical association physical interaction,two hybrid array,two hybrid prey pooling approach,validated two hybrid ComPPI,IntAct
BBS1 CCDC28B 16327777 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
HSPA1L CCDC28B 24234451 25348397 27173435 association,physical association physical interaction,tandem affinity purification,inference by socio-affinity scoring ComPPI,IntAct
IFT74 CCDC28B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
IFT81 CCDC28B 24234451 25348397 physical association physical interaction,inference by socio-affinity scoring ComPPI,IntAct
CCDC28B BBS5 16327777 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct
CCDC28B BBS7 16327777 24234451 25348397 physical association anti tag coimmunoprecipitation,physical interaction ComPPI,IntAct

Visualization










  Return