GENE：RAB29
GeneInfo:
| GeneAttribute | GeneDescription |
|---|---|
| GeneSymbol | RAB29 |
| FullNmae | RAB29, member RAS oncogene family |
| LocusType | gene with protein product |
| Status | Approved |
| HGNC_id | HGNC:9789 |
| EnsembleID | ENSG00000117280 |
| Uniprot | O14966 |
Protein Structure:
Gene Description in Publicaton:
| GeneSymbol | CellDeathType | PMID | Description | GeneType |
|---|---|---|---|---|
| RAB29 | autosis | 38538696 | The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) | retulator signature |
Go Annotation:
| GeneSymbol | Go id |
|---|---|
| RAB29 | GO:0001921,GO:0003924,GO:0005515,GO:0005525,GO:0005737,GO:0005739,GO:0005769,GO:0005773,GO:0005794,GO:0005801,GO:0005802,GO:0005802,GO:0005829,GO:0005856,GO:0005886,GO:0006886,GO:0007005,GO:0007030,GO:0007416,GO:0009617,GO:0010977,GO:0012505,GO:0019003,GO:0019894,GO:0030154,GO:0031267,GO:0032438,GO:0042110,GO:0042147,GO:0042470,GO:0043231,GO:0044788,GO:0048471,GO:0050862,GO:0055037,GO:0070062,GO:0070840,GO:0072657,GO:0090316,GO:0097708,GO:1901998,GO:1903441,GO:1905279 |
Protein-Protein Interaction(String):
Signalink 3.0 modificators
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| E2F4 | RAB29 | 17531812 | trascriptional regulation,stimulation | chromatin immunoprecipitation array | TFlink |
| ETS1 | RAB29 | 18971253 20019798 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| GATA2 | RAB29 | 19941826 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| YBX1 | RAB29 | 19151767 | trascriptional regulation,stimulation | chromatin immunoprecipitation assay | TFlink |
| PRDM14 | RAB29 | 18971253 20953172 | trascriptional regulation,stimulation | inferred by curator,chromatin immunoprecipitation assay | TFlink |
| SMARCA4 | RAB29 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| FOXA1 | RAB29 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| HNF4A | RAB29 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| MITF | RAB29 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| TRIM28 | RAB29 | 18971253 | trascriptional regulation,stimulation | inferred by curator | TFlink |
| Source | Target | Pmid | Interactiontype | Methods | Database |
|---|---|---|---|---|---|
| HSPA8 | RAB29 | 24234451 24510904 25348397 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| LDOC1 | RAB29 | 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| TRIM32 | RAB29 | 24234451 25348397 | physical association | two hybrid,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| LSM7 | RAB29 | 14525934 15231747 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid | ComPPI,HPRD,IntAct |
| PTPRO | RAB29 | 25348397 | N/A | physical interaction | ComPPI |
| CHM | RAB29 | 25348397 | N/A | physical interaction | ComPPI |
| RABGGTA | RAB29 | 25348397 | N/A | physical interaction | ComPPI |
| ITPR2 | RAB29 | 25348397 | N/A | physical interaction | ComPPI |
| GAK | RAB29 | 24234451 24510904 25348397 | association | anti tag coimmunoprecipitation | ComPPI,IntAct |
| TRIM27 | RAB29 | 24234451 25348397 | physical association | two hybrid,physical interaction,two hybrid array,two hybrid prey pooling approach | ComPPI,IntAct |
| ITPR1 | RAB29 | 25348397 | N/A | physical interaction | ComPPI |
| RAB29 | BEND7 | 25348397 | N/A | physical interaction | ComPPI |
| RAB29 | ITPR3 | 25348397 | N/A | physical interaction | ComPPI |
| RAB29 | CNOT6L | 25348397 | N/A | physical interaction | ComPPI |
| RAB29 | LRRK2 | 24234451 24510904 25348397 | colocalization,association,physical association | anti tag coimmunoprecipitation,protein array,fluorescence microscopy,confocal microscopy | ComPPI,IntAct |