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GENE：RBM48

GeneInfo:

GeneAttribute GeneDescription
GeneSymbol RBM48
FullNmae RNA binding motif protein 48
LocusType gene with protein product
Status Approved
HGNC_id HGNC:21785
EnsembleID ENSG00000127993
Uniprot Q5RL73

Protein Structure:

Gene Description in Publicaton:

GeneSymbol CellDeathType PMID Description GeneType
RBM48 autosis 38538696 The 18 RCD signatures collected from previous studies. Supplementary Table of Figures.xlsx (https://github.com/zwxiangya/RCDscore) retulator signature

Go Annotation:

GeneSymbol Go id
RBM48 GO:0003723,GO:0005515,GO:0005654,GO:0005654,GO:0005681,GO:0006397,GO:0008380

Protein-Protein Interaction(String):

Signalink 3.0 modificators

Source Target Pmid Interactiontype Methods Database
AR RBM48 20610535 trascriptional regulation,stimulation chromatin immunoprecipitation array TFlink
ETS1 RBM48 18971253 20019798 trascriptional regulation,stimulation inferred by curator,chromatin immunoprecipitation assay TFlink
SMARCA4 RBM48 18971253 trascriptional regulation,stimulation inferred by curator TFlink
CTCF RBM48 18971253 trascriptional regulation,stimulation inferred by curator TFlink
FOS RBM48 18971253 trascriptional regulation,stimulation inferred by curator TFlink
RUNX1 RBM48 18971253 trascriptional regulation,stimulation inferred by curator TFlink

Source Target Pmid Interactiontype Methods Database
URS000027080C RBM48 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS0000042E1F RBM48 22012620 25416803 mrna cleavage,inhibition clip TarBase
URS000003ABC4 RBM48 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00004AF715 RBM48 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS0000411752 RBM48 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS00000753AD RBM48 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000038446A RBM48 23824327 25416803 mrna cleavage,inhibition clip TarBase
URS000075C1E1 RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00002A8BC6 RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000032AE90 RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00003E5ECC RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000075A760 RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00002152A8 RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS0000137EDE RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000019907A RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS0000044FD7 RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS000029D9F1 RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS00001FC26E RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS0000083D87 RBM48 19536157 25416803 mrna cleavage,inhibition clip TarBase
URS0000250A40 RBM48 25416803 27292025 mrna cleavage,inhibition clip TarBase

Source Target Pmid Interactiontype Methods Database
KPNA2 RBM48 14525934 15383276 25348397 N/A experimental interaction detection,in vitro ComPPI,HPRD
TBC1D22B RBM48 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
NUDT21 RBM48 14525934 16169070 21900206 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
FAM90A1 RBM48 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
COX5B RBM48 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
GADD45G RBM48 14525934 15383276 24234451 25348397 physical association two hybrid,experimental interaction detection,physical interaction,in vitro,two hybrid ComPPI,HPRD,IntAct
ATPAF2 RBM48 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
VIM RBM48 14525934 15383276 24234451 25348397 physical association two hybrid,physical interaction,two hybrid ComPPI,HPRD,IntAct
CDKN1A RBM48 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
TRIB3 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
CCDC106 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SAT1 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
CDKN2C RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
TK1 RBM48 14525934 16169070 21900206 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SMN1 RBM48 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
COX17 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SPRED2 RBM48 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
PPP1R8 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
PSMD11 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
MAFG RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
PRG2 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RPA2 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
MNAT1 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RAB27A RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
HSPB1 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SH3GL3 RBM48 14525934 15383276 25348397 N/A two hybrid,two hybrid ComPPI,HPRD
RBM48 ZNF24 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RBM48 RFC5 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RBM48 WDR33 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RBM48 BTBD2 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RBM48 ID2 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RBM48 TNFSF10 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RBM48 CDK5RAP2 14525934 16169070 24234451 25348397 physical association physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
RBM48 BID 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
RBM48 ANXA7 21900206 24234451 25348397 physical association two hybrid,physical interaction ComPPI,IntAct
RBM48 APLP1 25348397 N/A physical interaction ComPPI
RBM48 GYS1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RBM48 NTAQ1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RBM48 SCNM1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RBM48 MLH1 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RBM48 PRKAB2 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
RBM48 POLR1C 24234451 25348397 physical association two hybrid,two hybrid array,two hybrid prey pooling approach ComPPI,IntAct
SULT1E1 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
PAFAH1B3 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
SERPINB9 RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct
ERH RBM48 14525934 16169070 24234451 25348397 physical association two hybrid,physical interaction,two hybrid pooling approach,two hybrid fragment pooling approach,two hybrid ComPPI,HPRD,IntAct

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